RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	INA	Q16352	499 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	TMEM63B	Q5T3F8	832 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	STXBP5	Q5T5C0	1151 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	SYDE2	Q5VT97	1194 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	C1orf146	Q5VVC0	180 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	TCERG1L	Q5VWI1	586 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	CIAPIN1	Q6FI81	312 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	LVRN	Q6Q4G3	990 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	TSHZ1	Q6ZSZ6	1077 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	MAEA	Q7L5Y9	396 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	KRT28	Q7Z3Y7	464 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	USP37	Q86T82	979 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	PATL1	Q86TB9	770 aa	Known RBP	10.71	□□□□□ -0.69
UBC-213	ENST00000546120	RSPH3	Q86UC2	560 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	ZNF34	Q8IZ26	560 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	RTKN2	Q8IZC4	609 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	SCAI	Q8N9R8	606 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	ADCY4	Q8NFM4	1077 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	PPP1R14C	Q8TAE6	165 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	GAB3	Q8WWW8	586 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	CMTM5	Q96DZ9	223 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	VCPIP1	Q96JH7	1222 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	FAM161B	Q96MY7	647 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	MBOAT7	Q96N66	472 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	ALS2	Q96Q42	1657 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	INTS2	Q9H0H0	1204 aa	Known RBP	10.71	□□□□□ -0.69
UBC-213	ENST00000546120	GOLPH3	Q9H4A6	298 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	NPHS2	Q9NP85	383 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	ARL8B	Q9NVJ2	186 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	HSFX1	Q9UBD0	423 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	ZNF652	Q9Y2D9	606 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	HBS1L	Q9Y450	684 aa	Known RBP	10.71	□□□□□ -0.69
UBC-213	ENST00000546120	PCDHB13	Q9Y5F0	798 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	MAD1L1	Q9Y6D9	718 aa		10.71	□□□□□ -0.69
UBC-213	ENST00000546120	RBM47	A0AV96	593 aa	Known RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	DNALI1	O14645	258 aa	Predicted RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	NKRF	O15226	690 aa	Known RBP eCLIP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	TP73	O15350	636 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	BUD23	O43709	281 aa	Known RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	AKAP3	O75969	853 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	ZBED1	O96006	694 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	CYP1A1	P04798	512 aa	Predicted RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	C8B	P07358	591 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	DLD	P09622	509 aa	Known RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	CDK4	P11802	303 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	ACTN1	P12814	892 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	ABCB4	P21439	1286 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	GTF2H1	P32780	548 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	PTPN7	P35236	360 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	RPA3	P35244	121 aa	Predicted RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	MLH1	P40692	756 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	SCNN1B	P51168	640 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	MTTP	P55157	894 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	WASHC5	Q12768	1159 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	AP3B2	Q13367	1082 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF211	Q13398	564 aa	Predicted RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	PDAP1	Q13442	181 aa	Known RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	PRKD1	Q15139	912 aa	Predicted RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	RARS2	Q5T160	578 aa	Known RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	UGT2A3	Q6UWM9	527 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	FRA10AC1	Q70Z53	315 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	ARC	Q7LC44	396 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	KIAA0825	Q8IV33	1275 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	C12orf56	Q8IXR9	622 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	ULK2	Q8IYT8	1036 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	CYP4X1	Q8N118	509 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	ATP11C	Q8NB49	1132 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	NEDD1	Q8NHV4	660 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	RASGRP4	Q8TDF6	673 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	STON2	Q8WXE9	905 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	PSPC1	Q8WXF1	523 aa	Known RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	SLC35B4	Q969S0	331 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	CCDC97	Q96F63	343 aa	Predicted RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	KCNK16	Q96T55	309 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	SERPINI1	Q99574	410 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	DHRS4	Q9BTZ2	278 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	UNK	Q9C0B0	810 aa	Known RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	MRPL40	Q9NQ50	206 aa	Known RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	TBC1D23	Q9NUY8	699 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	DMAC2	Q9NW81	257 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	MCM9	Q9NXL9	1143 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	UTP6	Q9NYH9	597 aa	Known RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	TMOD4	Q9NZQ9	345 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	SPATA7	Q9P0W8	599 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	PTBP2	Q9UKA9	531 aa	Known RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	ITGA11	Q9UKX5	1188 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	FAF1	Q9UNN5	650 aa	Predicted RBP	10.7	□□□□□ -0.7
UBC-213	ENST00000546120	COG5	Q9UP83	839 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	EFR3B	Q9Y2G0	817 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	PPME1	Q9Y570	386 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	WNK3	Q9BYP7	1800 aa		10.7	□□□□□ -0.7
UBC-213	ENST00000546120	PNMA6F	A0A0J9YX94	578 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	TMEM247	A6NEH6	219 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	FCHO1	O14526	889 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	CYTH3	O43739	400 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	PDE5A	O76074	875 aa		10.69	□□□□□ -0.7
UBC-213	ENST00000546120	FOS	P01100	380 aa	Predicted RBP	10.69	□□□□□ -0.7
UBC-213	ENST00000546120	CREB1	P16220	341 aa		10.69	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms