RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 RAB33AQ14088 237 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 ZNF699Q32M78 642 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 WDR72Q3MJ13 1102 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 LEXMQ3ZCV2 418 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 ZNF667Q5HYK9 610 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 TPGS2Q68CL5 300 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 KRT39Q6A163 491 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 ANKRD54Q6NXT1 300 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 RTL10Q7L3V2 364 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 DCP1BQ8IZD4 617 aaKnown RBP18.79■□□□□ 0.6
CD9-211ENST00000546073 TOP6BLQ8N6T0 577 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 EEF2KMTQ96G04 330 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 RIPOR3Q96MK2 946 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 SRRTQ9BXP5 876 aaKnown RBP18.79■□□□□ 0.6
CD9-211ENST00000546073 SNX25Q9H3E2 840 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 BARX2Q9UMQ3 279 aaPredicted RBP18.79■□□□□ 0.6
CD9-211ENST00000546073 TIMM13Q9Y5L4 95 aaPredicted RBP18.79■□□□□ 0.6
CD9-211ENST00000546073 H3BQ06 376 aaPredicted RBP18.78■□□□□ 0.6
CD9-211ENST00000546073 PPEF2O14830 753 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 OAZ2O95190 189 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 CD44P16070 742 aaKnown RBP18.78■□□□□ 0.6
CD9-211ENST00000546073 PCSK1P29120 753 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 WNT7BP56706 349 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 CLDN10P78369 228 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 SMARCB1Q12824 385 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 CTC1Q2NKJ3 1217 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 ATAT1Q5SQI0 421 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 CYP26C1Q6V0L0 522 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 ELMOD1Q8N336 334 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 KREMEN2Q8NCW0 462 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 TMEM8AQ9HCN3 771 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 MAN1C1Q9NR34 630 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 GDAP2Q9NXN4 497 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 NXF1Q9UBU9 619 aaKnown RBP18.78■□□□□ 0.6
CD9-211ENST00000546073 FBXL5Q9UKA1 691 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 KIAA1671Q9BY89 1806 aa18.78■□□□□ 0.6
CD9-211ENST00000546073 LINC01565O15544 149 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 TGM5O43548 720 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 XYLBO75191 536 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 CYP11A1P05108 521 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 FAM163BP0C2L3 166 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 EPCAMP16422 314 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 BMP6P22004 513 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 GCLMP48507 274 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 MXI1P50539 228 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 STX1AQ16623 288 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 UVSSAQ2YD98 709 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 PPM1LQ5SGD2 360 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 SLC8B1Q6J4K2 584 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 TTI2Q6NXR4 508 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 CAVIN1Q6NZI2 390 aaKnown RBP18.77■□□□□ 0.6
CD9-211ENST00000546073 CD300LGQ6UXG3 332 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 SV2AQ7L0J3 742 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 ANKRD20A12PQ8NF67 263 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 ZNF461Q8TAF7 563 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 SLC22A17Q8WUG5 538 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 NECTIN4Q96NY8 510 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 ASB2Q96Q27 587 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 CLSTN3Q9BQT9 956 aa18.77■□□□□ 0.6
CD9-211ENST00000546073 CHD9Q3L8U1 2897 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 SPTLC1O15269 473 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 STAU1O95793 577 aaKnown RBP18.76■□□□□ 0.59
CD9-211ENST00000546073 LRG1P02750 347 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 C4BPAP04003 597 aaKnown RBP18.76■□□□□ 0.59
CD9-211ENST00000546073 TRIM49P0CI25 452 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 TRIM49CP0CI26 452 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 PRKCSHP14314 528 aaPredicted RBP18.76■□□□□ 0.59
CD9-211ENST00000546073 MTHFRP42898 656 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 PMS1P54277 932 aaKnown RBP18.76■□□□□ 0.59
CD9-211ENST00000546073 MYL6P60660 151 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 DLG4P78352 724 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 PLD1Q13393 1074 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 SMAD4Q13485 552 aaKnown RBP18.76■□□□□ 0.59
CD9-211ENST00000546073 MRPL58Q14197 206 aaKnown RBP18.76■□□□□ 0.59
CD9-211ENST00000546073 MAPRE1Q15691 268 aaKnown RBP18.76■□□□□ 0.59
CD9-211ENST00000546073 CLUL1Q15846 466 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 ZACNQ401N2 412 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 TDRD10Q5VZ19 366 aaKnown RBP18.76■□□□□ 0.59
CD9-211ENST00000546073 WSCD1Q658N2 575 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 PTCRAQ6ISU1 281 aaPredicted RBP18.76■□□□□ 0.59
CD9-211ENST00000546073 ADGRF2Q8IZF7 708 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 CYP4F11Q9HBI6 524 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 ZDHHC7Q9NXF8 308 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 SIX4Q9UIU6 781 aa18.76■□□□□ 0.59
CD9-211ENST00000546073 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.76■□□□□ 0.59
CD9-211ENST00000546073 PRRC2BQ5JSZ5 2229 aaKnown RBP18.76■□□□□ 0.59
CD9-211ENST00000546073 CST3P01034 146 aaPredicted RBP18.75■□□□□ 0.59
CD9-211ENST00000546073 SPATA31D3P0C874 917 aa18.75■□□□□ 0.59
CD9-211ENST00000546073 MTIF2P46199 727 aaKnown RBP18.75■□□□□ 0.59
CD9-211ENST00000546073 COL19A1Q14993 1142 aa18.75■□□□□ 0.59
CD9-211ENST00000546073 NFE2Q16621 373 aaPredicted RBP18.75■□□□□ 0.59
CD9-211ENST00000546073 KLHL40Q2TBA0 621 aa18.75■□□□□ 0.59
CD9-211ENST00000546073 TJAP1Q5JTD0 557 aa18.75■□□□□ 0.59
CD9-211ENST00000546073 RARS2Q5T160 578 aaKnown RBP18.75■□□□□ 0.59
CD9-211ENST00000546073 SPATA31D4Q6ZUB0 917 aa18.75■□□□□ 0.59
CD9-211ENST00000546073 FBXL13Q8NEE6 735 aa18.75■□□□□ 0.59
CD9-211ENST00000546073 OR6B3Q8NGW1 331 aa18.75■□□□□ 0.59
CD9-211ENST00000546073 C2orf15Q8WU43 125 aaKnown RBP18.75■□□□□ 0.59
CD9-211ENST00000546073 ZNF516Q92618 1163 aa18.75■□□□□ 0.59
CD9-211ENST00000546073 PRDM6Q9NQX0 595 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms