RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 CYP3A5P20815 502 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 MARCKSP29966 332 aaPredicted RBP18.16■□□□□ 0.5
CPSF7-225ENST00000545934 CDC25AP30304 524 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 SOX9P48436 509 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 FNTBP49356 437 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 STRN3Q13033 797 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 DUSP4Q13115 394 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 SIM2Q14190 667 aaPredicted RBP18.16■□□□□ 0.5
CPSF7-225ENST00000545934 LRRC32Q14392 662 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 CSRP2Q16527 193 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 HYIQ5T013 277 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 STXBP5Q5T5C0 1151 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 CENPPQ6IPU0 288 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 TXNDC11Q6PKC3 985 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 CSGALNACT1Q8TDX6 532 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 PGLYRP2Q96PD5 576 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 SEMA4GQ9NTN9 838 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 RBM12Q9NTZ6 932 aaKnown RBP18.16■□□□□ 0.5
CPSF7-225ENST00000545934 KCNG1Q9UIX4 513 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 TIMM13Q9Y5L4 95 aaPredicted RBP18.16■□□□□ 0.5
CPSF7-225ENST00000545934 ZFHX4Q86UP3 3567 aa18.16■□□□□ 0.5
CPSF7-225ENST00000545934 TPRP12270 2363 aaKnown RBP18.15■□□□□ 0.5
CPSF7-225ENST00000545934 OR6C75A6NL08 312 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 SLC38A8A6NNN8 435 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 CLDN3O15551 220 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 FAM189A1O60320 539 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 ADRB2P07550 413 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 CLTAP09496 248 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 HOXA6P31267 233 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 HMGN5P82970 282 aaKnown RBP18.15■□□□□ 0.5
CPSF7-225ENST00000545934 SPAG1Q07617 926 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 DGKKQ5KSL6 1271 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 PRR23CQ6ZRP0 262 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 PRR23BQ6ZRT6 265 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 Q6ZS52 159 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 GAREM2Q75VX8 874 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 LONP2Q86WA8 852 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 RALGPS2Q86X27 583 aaPredicted RBP18.15■□□□□ 0.5
CPSF7-225ENST00000545934 PNMA5Q96PV4 448 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.15■□□□□ 0.5
CPSF7-225ENST00000545934 C2orf42Q9NWW7 574 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 OBP2AQ9NY56 170 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 UBQLN1Q9UMX0 589 aaKnown RBP18.15■□□□□ 0.5
CPSF7-225ENST00000545934 ACACBO00763 2458 aa18.15■□□□□ 0.5
CPSF7-225ENST00000545934 ATG2BQ96BY7 2078 aa18.14■□□□□ 0.5
CPSF7-225ENST00000545934 MTMR11A4FU01 709 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 SPECC1L-ADORA2AF8WAN1 911 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 TYMPP19971 482 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 WEE1P30291 646 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 CTHP32929 405 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 EPHB3P54753 998 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 NCKAP1LP55160 1127 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 SRSF5Q13243 272 aaKnown RBP18.14■□□□□ 0.49
CPSF7-225ENST00000545934 CCINQ13939 588 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 MYBPC2Q14324 1141 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 ARID3BQ8IVW6 561 aaPredicted RBP18.14■□□□□ 0.49
CPSF7-225ENST00000545934 YAF2Q8IY57 180 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 KCTD17Q8N5Z5 321 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 SYT2Q8N9I0 419 aaPredicted RBP18.14■□□□□ 0.49
CPSF7-225ENST00000545934 PSMG2Q969U7 264 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 SLITRK6Q9H5Y7 841 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 HSFX1Q9UBD0 423 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 ASB3Q9Y575 518 aa18.14■□□□□ 0.49
CPSF7-225ENST00000545934 MAP1BP46821 2468 aaKnown RBP18.13■□□□□ 0.49
CPSF7-225ENST00000545934 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.13■□□□□ 0.49
CPSF7-225ENST00000545934 TNFSF9P41273 254 aa18.13■□□□□ 0.49
CPSF7-225ENST00000545934 KPNA1P52294 538 aaPredicted RBP18.13■□□□□ 0.49
CPSF7-225ENST00000545934 SMTNP53814 917 aa18.13■□□□□ 0.49
CPSF7-225ENST00000545934 SLC12A3P55017 1021 aa18.13■□□□□ 0.49
CPSF7-225ENST00000545934 GNL2Q13823 731 aaKnown RBP18.13■□□□□ 0.49
CPSF7-225ENST00000545934 ARHGAP29Q52LW3 1261 aa18.13■□□□□ 0.49
CPSF7-225ENST00000545934 PPM1JQ5JR12 505 aa18.13■□□□□ 0.49
CPSF7-225ENST00000545934 DTHD1Q6ZMT9 781 aa18.13■□□□□ 0.49
CPSF7-225ENST00000545934 DNAJB7Q7Z6W7 309 aaPredicted RBP18.13■□□□□ 0.49
CPSF7-225ENST00000545934 TTC9BQ8N6N2 239 aa18.13■□□□□ 0.49
CPSF7-225ENST00000545934 KIF12Q96FN5 646 aa18.13■□□□□ 0.49
CPSF7-225ENST00000545934 KCND2Q9NZV8 630 aa18.13■□□□□ 0.49
CPSF7-225ENST00000545934 SLC27A5Q9Y2P5 690 aa18.13■□□□□ 0.49
CPSF7-225ENST00000545934 ANAPC1Q9H1A4 1944 aa18.13■□□□□ 0.49
CPSF7-225ENST00000545934 HELZP42694 1942 aaKnown RBP18.12■□□□□ 0.49
CPSF7-225ENST00000545934 LACTBL1A8MY62 500 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 PPEF2O14830 753 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 SEC24BO95487 1268 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 HOXC13P31276 330 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 ALDH1A3P47895 512 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 GUCY2FP51841 1108 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 RAD51AP2Q09MP3 1159 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 OVOS1Q6IE37 1185 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 WDR5BQ86VZ2 330 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 GPIHBP1Q8IV16 184 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 SYNPOQ8N3V7 929 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 FAM160A2Q8N612 972 aaPredicted RBP18.12■□□□□ 0.49
CPSF7-225ENST00000545934 ZFYVE19Q96K21 471 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 TSPAN18Q96SJ8 248 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 TMEM209Q96SK2 561 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 GTSE1Q9NYZ3 720 aa18.12■□□□□ 0.49
CPSF7-225ENST00000545934 GDF9O60383 454 aa18.11■□□□□ 0.49
CPSF7-225ENST00000545934 FOXD2O60548 495 aaPredicted RBP18.11■□□□□ 0.49
CPSF7-225ENST00000545934 PRAMEF12O95522 483 aa18.11■□□□□ 0.49
CPSF7-225ENST00000545934 FGF19O95750 216 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms