RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 NFX1Q12986 1120 aaKnown RBP16.56■□□□□ 0.24
SCAP-215ENST00000545718 ORC1Q13415 861 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 CNGA2Q16280 664 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 TRIM72Q6ZMU5 477 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 CCDC89Q8N998 374 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 GLIS1Q8NBF1 620 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 NLRP4Q96MN2 994 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 PPP1R16BQ96T49 567 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 HAUS2Q9NVX0 235 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 DNPEPQ9ULA0 475 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.56■□□□□ 0.24
SCAP-215ENST00000545718 IVNS1ABPQ9Y6Y0 642 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 CNTNAP2Q9UHC6 1331 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 LRRD1A4D1F6 860 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 C5orf60A6NFR6 353 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 PSTPIP1O43586 416 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 ADCY3O60266 1144 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 ANKRD20A8PQ5CZ79 823 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 MFSD7Q6UXD7 560 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 APOBEC3FQ8IUX4 373 aaKnown RBP16.56■□□□□ 0.24
SCAP-215ENST00000545718 C3orf20Q8ND61 904 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 C12orf42Q96LP6 360 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 PCYT2Q99447 389 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 FHDC1Q9C0D6 1143 aaPredicted RBP16.56■□□□□ 0.24
SCAP-215ENST00000545718 STYXL1Q9Y6J8 313 aa16.56■□□□□ 0.24
SCAP-215ENST00000545718 WDR81Q562E7 1941 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 TCP11X1B4DZS4 312 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 BRAFP15056 766 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 ABCD1P33897 745 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 MTM1Q13496 603 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 FAM133BQ5BKY9 247 aaKnown RBP16.55■□□□□ 0.24
SCAP-215ENST00000545718 TXNRD3NBQ6F5E7 133 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 PLEKHA7Q6IQ23 1121 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 GPAT2Q6NUI2 795 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 RHBDF2Q6PJF5 856 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 DPH6Q7L8W6 267 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 CNPY4Q8N129 248 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 SLC16A10Q8TF71 515 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 TRAPPC12Q8WVT3 735 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 CENPTQ96BT3 561 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 CISHQ9NSE2 258 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 BTBD7Q9P203 1132 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 NOP56O00567 594 aaKnown RBP16.55■□□□□ 0.24
SCAP-215ENST00000545718 FARP2O94887 1054 aaPredicted RBP16.55■□□□□ 0.24
SCAP-215ENST00000545718 GH1P01241 217 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 PGK2P07205 417 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 CCNG2Q16589 344 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 ICE2Q659A1 982 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 NUGGCQ68CJ6 796 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 RHPN2Q8IUC4 686 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 RBM15Q96T37 977 aaKnown RBP eCLIP16.55■□□□□ 0.24
SCAP-215ENST00000545718 ROPN1BQ9BZX4 212 aaPredicted RBP16.55■□□□□ 0.24
SCAP-215ENST00000545718 EFCC1Q9HA90 598 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 ROPN1Q9HAT0 212 aaPredicted RBP16.55■□□□□ 0.24
SCAP-215ENST00000545718 FGFR1OP2Q9NVK5 253 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 AFG3L2Q9Y4W6 797 aa16.55■□□□□ 0.24
SCAP-215ENST00000545718 INO80B-WBP1J3KQ70 363 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 TMEM191BP0C7N4 346 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 KLF1Q13351 362 aaPredicted RBP16.54■□□□□ 0.24
SCAP-215ENST00000545718 SMTNL2Q2TAL5 461 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 CYP4X1Q8N118 509 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 TMEM130Q8N3G9 435 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 CEP120Q8N960 986 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 SLCO2A1Q92959 643 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 INO80BQ9C086 356 aaPredicted RBP16.54■□□□□ 0.24
SCAP-215ENST00000545718 R3HDMLQ9H3Y0 253 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 SAYSD1Q9NPB0 183 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 IP6K2Q9UHH9 426 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 GGA2Q9UJY4 613 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 PHIPQ8WWQ0 1821 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 GOLGA8MH3BSY2 632 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 SCTRP47872 440 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 MCCD1P59942 119 aaPredicted RBP16.54■□□□□ 0.24
SCAP-215ENST00000545718 TMED2Q15363 201 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 FAM160B1Q5W0V3 765 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 SYDE1Q6ZW31 735 aaPredicted RBP16.54■□□□□ 0.24
SCAP-215ENST00000545718 PHF13Q86YI8 300 aaPredicted RBP16.54■□□□□ 0.24
SCAP-215ENST00000545718 KATNAL2Q8IYT4 538 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 EXD1Q8NHP7 514 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 TMEM109Q9BVC6 243 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 C10orf88Q9H8K7 445 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 ZWILCHQ9H900 591 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 SLC40A1Q9NP59 571 aa16.54■□□□□ 0.24
SCAP-215ENST00000545718 POC1B-GALNT4F8VUJ3 575 aa16.53■□□□□ 0.24
SCAP-215ENST00000545718 CSDE1O75534 798 aaKnown RBP16.53■□□□□ 0.24
SCAP-215ENST00000545718 PRKCBP05771 671 aa16.53■□□□□ 0.24
SCAP-215ENST00000545718 ARSEP51690 589 aa16.53■□□□□ 0.24
SCAP-215ENST00000545718 GTF2A1P52655 376 aaPredicted RBP16.53■□□□□ 0.24
SCAP-215ENST00000545718 C1QBPQ07021 282 aaKnown RBP16.53■□□□□ 0.24
SCAP-215ENST00000545718 GPS1Q13098 491 aa16.53■□□□□ 0.24
SCAP-215ENST00000545718 DNERQ8NFT8 737 aa16.53■□□□□ 0.24
SCAP-215ENST00000545718 SERPINB12Q96P63 405 aa16.53■□□□□ 0.24
SCAP-215ENST00000545718 MRPL4Q9BYD3 311 aaKnown RBP16.53■□□□□ 0.24
SCAP-215ENST00000545718 NSRP1Q9H0G5 558 aaKnown RBP16.53■□□□□ 0.24
SCAP-215ENST00000545718 SAE1Q9UBE0 346 aaPredicted RBP16.53■□□□□ 0.24
SCAP-215ENST00000545718 ATP2A1O14983 1001 aa16.53■□□□□ 0.24
SCAP-215ENST00000545718 MMP8P22894 467 aa16.53■□□□□ 0.24
SCAP-215ENST00000545718 RAP1GAPP47736 663 aa16.53■□□□□ 0.24
SCAP-215ENST00000545718 PTP4A2Q12974 167 aa16.53■□□□□ 0.24
SCAP-215ENST00000545718 VGLL4Q14135 290 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms