RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CCDC93Q567U6 631 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 TAPT1Q6NXT6 567 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 SLC4A10Q6U841 1118 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 TMPRSS9Q7Z410 1059 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 PEG10Q86TG7 708 aaKnown RBP6.22□□□□□ -1.41
SNHG1-224ENST00000545688 ASPSCR1Q9BZE9 553 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 MAN1C1Q9NR34 630 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 ASB6Q9NWX5 421 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 SLC17A6Q9P2U8 582 aa6.22□□□□□ -1.41
SNHG1-224ENST00000545688 LRRC3CA6NJW4 275 aa6.21□□□□□ -1.42
SNHG1-224ENST00000545688 ANXA1P04083 346 aa6.21□□□□□ -1.42
SNHG1-224ENST00000545688 PPP3CBP16298 524 aa6.21□□□□□ -1.42
SNHG1-224ENST00000545688 CCND1P24385 295 aa6.21□□□□□ -1.42
SNHG1-224ENST00000545688 POU6F2P78424 691 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-224ENST00000545688 KAZNQ674X7 775 aa6.21□□□□□ -1.42
SNHG1-224ENST00000545688 TOR1AIP2Q8NFQ8 470 aa6.21□□□□□ -1.42
SNHG1-224ENST00000545688 MYCBPAPQ8TBZ2 947 aa6.21□□□□□ -1.42
SNHG1-224ENST00000545688 FBXO41Q8TF61 875 aa6.21□□□□□ -1.42
SNHG1-224ENST00000545688 ZNF384Q8TF68 577 aa6.21□□□□□ -1.42
SNHG1-224ENST00000545688 SNX19Q92543 992 aa6.21□□□□□ -1.42
SNHG1-224ENST00000545688 TRIB1Q96RU8 372 aa6.21□□□□□ -1.42
SNHG1-224ENST00000545688 ZNF785A8K8V0 405 aa6.2□□□□□ -1.42
SNHG1-224ENST00000545688 PSMC1P62191 440 aaKnown RBP6.2□□□□□ -1.42
SNHG1-224ENST00000545688 KRTAP1-1Q07627 177 aa6.2□□□□□ -1.42
SNHG1-224ENST00000545688 MICALCLQ6ZW33 695 aa6.2□□□□□ -1.42
SNHG1-224ENST00000545688 MIER2Q8N344 545 aa6.2□□□□□ -1.42
SNHG1-224ENST00000545688 SCAMP4Q969E2 229 aa6.2□□□□□ -1.42
SNHG1-224ENST00000545688 SMOQ99835 787 aa6.2□□□□□ -1.42
SNHG1-224ENST00000545688 PCDH12Q9NPG4 1184 aa6.2□□□□□ -1.42
SNHG1-224ENST00000545688 SIDT1Q9NXL6 827 aaKnown RBP6.2□□□□□ -1.42
SNHG1-224ENST00000545688 COL4A3BPQ9Y5P4 624 aa6.2□□□□□ -1.42
SNHG1-224ENST00000545688 SETD1BQ9UPS6 1966 aaKnown RBP6.19□□□□□ -1.42
SNHG1-224ENST00000545688 ADM5C9JUS6 153 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 E7ENX8 843 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 CHRM2P08172 466 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 ELFN1P0C7U0 828 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 LPOP22079 712 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-224ENST00000545688 HNRNPMP52272 730 aaKnown RBP eCLIP6.19□□□□□ -1.42
SNHG1-224ENST00000545688 NHLH1Q02575 133 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 TAP2Q03519 686 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 HLXQ14774 488 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-224ENST00000545688 TXNRD1Q16881 649 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 NBPF8Q3BBV2 869 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 AKNAD1Q5T1N1 836 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 PDSS2Q86YH6 399 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 PGBD1Q96JS3 809 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 UROC1Q96N76 676 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 C1orf43Q9BWL3 253 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 BRD9Q9H8M2 597 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 SLAMF7Q9NQ25 335 aa6.19□□□□□ -1.42
SNHG1-224ENST00000545688 MRPS18AQ9NVS2 196 aaKnown RBP6.19□□□□□ -1.42
SNHG1-224ENST00000545688 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-224ENST00000545688 PRSS29PA6NIE9 313 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 POLRMTO00411 1230 aaKnown RBP6.18□□□□□ -1.42
SNHG1-224ENST00000545688 ORC4O43929 436 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 GJB1P08034 283 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 GNAI3P08754 354 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 SMARCA1P28370 1054 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 CYP2C19P33261 490 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 GRIA3P42263 894 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 NPTX2P47972 431 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 FXR1P51114 621 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNHG1-224ENST00000545688 ZNF135P52742 658 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-224ENST00000545688 GNAI1P63096 354 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 PTPRRQ15256 657 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 ZKSCAN2Q63HK3 967 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 SLC30A10Q6XR72 485 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 B3GALNT2Q8NCR0 500 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 C3orf20Q8ND61 904 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 POC1BQ8TC44 478 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 RLIMQ9NVW2 624 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 ETAA1Q9NY74 926 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 ARPP21Q9UBL0 812 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-224ENST00000545688 PCDHA3Q9Y5H8 950 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 ENTPD2Q9Y5L3 495 aa6.18□□□□□ -1.42
SNHG1-224ENST00000545688 CCDC151A5D8V7 595 aa6.17□□□□□ -1.42
SNHG1-224ENST00000545688 RBMXL2O75526 392 aaKnown RBP6.17□□□□□ -1.42
SNHG1-224ENST00000545688 PRDX5P30044 214 aa6.17□□□□□ -1.42
SNHG1-224ENST00000545688 PHKA1P46020 1223 aa6.17□□□□□ -1.42
SNHG1-224ENST00000545688 RECQLP46063 649 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-224ENST00000545688 GRASPQ7Z6J2 395 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-224ENST00000545688 FAM9AQ8IZU1 332 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-224ENST00000545688 SMOC2Q9H3U7 446 aa6.17□□□□□ -1.42
SNHG1-224ENST00000545688 GPR35Q9HC97 309 aa6.17□□□□□ -1.42
SNHG1-224ENST00000545688 GNL3LQ9NVN8 582 aaKnown RBP6.17□□□□□ -1.42
SNHG1-224ENST00000545688 CFAP97Q9P2B7 532 aa6.17□□□□□ -1.42
SNHG1-224ENST00000545688 AGAP1Q9UPQ3 857 aa6.17□□□□□ -1.42
SNHG1-224ENST00000545688 POLHQ9Y253 713 aa6.17□□□□□ -1.42
SNHG1-224ENST00000545688 FRMD4BQ9Y2L6 1034 aa6.17□□□□□ -1.42
SNHG1-224ENST00000545688 SPEF1Q9Y4P9 236 aa6.17□□□□□ -1.42
SNHG1-224ENST00000545688 A0A0B4J269 797 aa6.16□□□□□ -1.42
SNHG1-224ENST00000545688 LINC00473A8K010 186 aa6.16□□□□□ -1.42
SNHG1-224ENST00000545688 VWC2LB2RUY7 222 aa6.16□□□□□ -1.42
SNHG1-224ENST00000545688 PDCP20941 246 aa6.16□□□□□ -1.42
SNHG1-224ENST00000545688 PIK3CGP48736 1102 aa6.16□□□□□ -1.42
SNHG1-224ENST00000545688 NOGQ13253 232 aa6.16□□□□□ -1.42
SNHG1-224ENST00000545688 TUBB3Q13509 450 aa6.16□□□□□ -1.42
SNHG1-224ENST00000545688 TSTD2Q5T7W7 516 aa6.16□□□□□ -1.42
SNHG1-224ENST00000545688 FAM90A1Q86YD7 464 aa6.16□□□□□ -1.42
SNHG1-224ENST00000545688 RGMAQ96B86 450 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms