RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 EXOSC10Q01780 885 aaKnown RBP16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 CYP4A11Q02928 519 aa16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 ANO7Q6IWH7 933 aa16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 HDDC3Q8N4P3 179 aa16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 TSTD1Q8NFU3 115 aa16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 RLN3Q8WXF3 142 aa16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 ADAMTS14Q8WXS8 1223 aa16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 PGLYRP2Q96PD5 576 aa16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 OBP2AQ9NY56 170 aa16.93■□□□□ 0.3
CLSTN3-216ENST00000545663 COL12A1Q99715 3063 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 LRRIQ4A6NIV6 560 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 PRPF3O43395 683 aaKnown RBP16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 OR4Q2P0C623 313 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 FTH1P19P0C7X4 201 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 ARSAP15289 507 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 MCM2P49736 904 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 CYP4F8P98187 520 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 PSMD2Q13200 908 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 PTPAQ15257 358 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 TRIP6Q15654 476 aaKnown RBP16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 PPP4R3CPQ6ZMV5 832 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 ZNF843Q8N446 348 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 UROC1Q96N76 676 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 FNBP1Q96RU3 617 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 LSG1Q9H089 658 aaKnown RBP16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 POLR3FQ9H1D9 316 aaPredicted RBP16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 FZD8Q9H461 694 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 GPRC5CQ9NQ84 441 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 THG1LQ9NWX6 298 aaKnown RBP16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 DDX25Q9UHL0 483 aaKnown RBP16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 SLC27A5Q9Y2P5 690 aa16.92■□□□□ 0.3
CLSTN3-216ENST00000545663 SHROOM3Q8TF72 1996 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 ATMQ13315 3056 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 SMIM28A0A1B0GU29 152 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 N4BP3O15049 544 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 SH3BP5O60239 455 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 SOAT2O75908 522 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 CFIP05156 583 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 CPB1P15086 417 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 DRD1P21728 446 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 DUSP4Q13115 394 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 TMEM132AQ24JP5 1023 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 SLC23A3Q6PIS1 610 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 MAEAQ7L5Y9 396 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 DNAJB7Q7Z6W7 309 aaPredicted RBP16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 C11orf74Q86VG3 221 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 SYT12Q8IV01 421 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 TPH2Q8IWU9 490 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 P2RY13Q9BPV8 354 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 PRMT7Q9NVM4 692 aaPredicted RBP16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 CIZ1Q9ULV3 898 aaPredicted RBP16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 CCL26Q9Y258 94 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 ADAMTS9Q9P2N4 1935 aa16.91■□□□□ 0.3
CLSTN3-216ENST00000545663 PODXLO00592 558 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 TNFRSF10BO14763 440 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 SYN3O14994 580 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 LIG1P18858 919 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 ITPKAP23677 461 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 GABRR2P28476 465 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 ATXN3P54252 364 aaPredicted RBP16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 EPHB3P54753 998 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 NECTIN1Q15223 517 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 EPHA7Q15375 998 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 RASSF3Q86WH2 238 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 TTC30AQ86WT1 665 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 MDGA1Q8NFP4 955 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 RIN3Q8TB24 985 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 SLC46A2Q9BY10 475 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 ZSWIM4Q9H7M6 989 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 TPCN1Q9ULQ1 816 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 ARID2Q68CP9 1835 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 SPTA1P02549 2419 aa16.9■□□□□ 0.3
CLSTN3-216ENST00000545663 TK2O00142 265 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 OPHN1O60890 802 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 SLITRK3O94933 977 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 CDR1P51861 262 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 CYP4F3Q08477 520 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 PRPF4BQ13523 1007 aaKnown RBP16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 NCAPH2Q6IBW4 605 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 LPCAT2Q7L5N7 544 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 SLCO6A1Q86UG4 719 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 TTC9BQ8N6N2 239 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 BEST2Q8NFU1 509 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 PRIMPOLQ96LW4 560 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 PILRBQ9UKJ0 227 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 MAFFQ9ULX9 164 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 MGAQ8IWI9 3026 aa16.89■□□□□ 0.29
CLSTN3-216ENST00000545663 PI4KAP42356 2102 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 A0A087WV48 116 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 J3QKU1 62 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 ATXN7O15265 892 aaPredicted RBP16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 MAP3K13O43283 966 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 HNRNPLP14866 589 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 NLRP5P59047 1200 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 MAPK6Q16659 721 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 FAM187BQ17R55 369 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 FBXO43Q4G163 708 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 ZNF280DQ6N043 979 aa16.88■□□□□ 0.29
CLSTN3-216ENST00000545663 TMEM130Q8N3G9 435 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms