RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 LEXMQ3ZCV2 418 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 DUSP28Q4G0W2 176 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 TAPT1Q6NXT6 567 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 NFRKBQ6P4R8 1299 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 ARHGAP36Q6ZRI8 547 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 CEP68Q76N32 757 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 ZNF765Q7L2R6 523 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 THAP5Q7Z6K1 395 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 FAM160B2Q86V87 743 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 CMTR2Q8IYT2 770 aaKnown RBP7.06□□□□□ -1.28
CPSF7-222ENST00000544585 UBE2FQ969M7 185 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 KIF1BPQ96EK5 621 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 TRMT2BQ96GJ1 504 aaKnown RBP7.06□□□□□ -1.28
CPSF7-222ENST00000544585 AIFM3Q96NN9 605 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 MTG1Q9BT17 334 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-222ENST00000544585 SARGQ9BW04 601 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 CDIP1Q9H305 208 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 A1CFQ9NQ94 594 aaKnown RBP7.06□□□□□ -1.28
CPSF7-222ENST00000544585 TOPORSQ9NS56 1045 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-222ENST00000544585 PAG1Q9NWQ8 432 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 ARPP21Q9UBL0 812 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-222ENST00000544585 ADD3Q9UEY8 706 aaKnown RBP7.06□□□□□ -1.28
CPSF7-222ENST00000544585 USP25Q9UHP3 1055 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 CTNNA3Q9UI47 895 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 TNNQ9UQP3 1299 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 EXOC6BQ9Y2D4 811 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 BDP1A6H8Y1 2624 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 EPOPA6NHQ4 379 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 FAM170BA6NMN3 283 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 WASH4PA8MWX3 477 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 TMEM232C9JQI7 657 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 H3BS24 57 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 NKRFO15226 690 aaKnown RBP eCLIP7.05□□□□□ -1.28
CPSF7-222ENST00000544585 LPXNO60711 386 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 TTLL1O95922 423 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 ATP5JP18859 108 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 GPR158Q5T848 1215 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 HLA-DQA1Q5Y7H0 255 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 SLFN13Q68D06 897 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 KRT40Q6A162 431 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 CEP85Q6P2H3 762 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 EPM2AIP1Q7L775 607 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-222ENST00000544585 CMIPQ8IY22 773 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 FTSJ3Q8IY81 847 aaKnown RBP7.05□□□□□ -1.28
CPSF7-222ENST00000544585 FBXL6Q8N531 539 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 ZNF610Q8N9Z0 462 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 GMCL1P1Q8NEA9 526 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 HSPA12BQ96MM6 686 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 UIMC1Q96RL1 719 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 ELF4Q99607 663 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-222ENST00000544585 RAD9AQ99638 391 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 WDR11Q9BZH6 1224 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 UPF3BQ9BZI7 483 aaKnown RBP7.05□□□□□ -1.28
CPSF7-222ENST00000544585 BOLA2Q9H3K6 86 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 UBE2ZQ9H832 354 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-222ENST00000544585 SMURF1Q9HCE7 757 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 IL1RAPL2Q9NP60 686 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 CD320Q9NPF0 282 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 PDGFCQ9NRA1 345 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 RNF146Q9NTX7 359 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 TRMT13Q9NUP7 481 aaKnown RBP7.05□□□□□ -1.28
CPSF7-222ENST00000544585 MTMR4Q9NYA4 1195 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 ADGRE2Q9UHX3 823 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 FAM50BQ9Y247 325 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 MUC6Q6W4X9 2439 aa7.05□□□□□ -1.28
CPSF7-222ENST00000544585 MYO5AQ9Y4I1 1855 aaKnown RBP7.04□□□□□ -1.28
CPSF7-222ENST00000544585 A0A0G2JMZ2 1700 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 ZBED9Q6R2W3 1325 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 IGKV6D-41A0A0C4DH26 115 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 ABHD14A-ACY1A0A1B0GW23 586 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 HMX2A2RU54 273 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 B4DLN1 442 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 KCNK3O14649 394 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 PCDHGA12O60330 932 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 MYL3P08590 195 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 ALAS1P13196 640 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 LPOP22079 712 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-222ENST00000544585 RPL10P27635 214 aaKnown RBP7.04□□□□□ -1.28
CPSF7-222ENST00000544585 CLCN7P51798 805 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 STAT2P52630 851 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 KIF11P52732 1056 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 MRPL12P52815 198 aaKnown RBP7.04□□□□□ -1.28
CPSF7-222ENST00000544585 OXCT1P55809 520 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 GBX1Q14549 363 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 SMAD2Q15796 467 aaKnown RBP7.04□□□□□ -1.28
CPSF7-222ENST00000544585 NKPD1Q17RQ9 610 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 GAB4Q2WGN9 574 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 FRMD7Q6ZUT3 714 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 PTRH1Q86Y79 214 aaKnown RBP7.04□□□□□ -1.28
CPSF7-222ENST00000544585 ITPRIPQ8IWB1 547 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 PJA1Q8NG27 643 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-222ENST00000544585 CAGE1Q8TC20 777 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 LMBR1Q8WVP7 490 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 TTC17Q96AE7 1141 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 IL17RAQ96F46 866 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 MFSD14AQ96MC6 490 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 TGS1Q96RS0 853 aaKnown RBP7.04□□□□□ -1.28
CPSF7-222ENST00000544585 STRBPQ96SI9 672 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms