RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ASS1P00966 412 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ATP1A3P13637 1013 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 P4HA1P13674 534 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 FGFR3P22607 806 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 IGFBP4P22692 258 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 COPB1P53618 953 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 NOP14P78316 857 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 DSG1Q02413 1049 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 YWHAHQ04917 246 aaPredicted RBP15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 MIIPQ5JXC2 388 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SPOPLQ6IQ16 392 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PDE12Q6L8Q7 609 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 METTL23Q86XA0 190 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SEMA4DQ92854 862 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 MRPL38Q96DV4 380 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 VRTNQ9H8Y1 702 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 NGRNQ9NPE2 291 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 CHST7Q9NS84 486 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 LIMA1Q9UHB6 759 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 DSEQ9UL01 958 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 COQ4Q9Y3A0 265 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PMM2O15305 246 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 LRRN2O75325 713 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 VARS2Q5ST30 1063 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 FKBP15Q5T1M5 1219 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 WSCD1Q658N2 575 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PDXDC1Q6P996 788 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PRSS55Q6UWB4 352 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 GBP6Q6ZN66 633 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ANKS3Q6ZW76 656 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 GCNT4Q9P109 453 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 POLIQ9UNA4 740 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PCDHGC5Q9Y5F6 944 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TSC2P49815 1807 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 H7C4K7 107 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 FSCN2O14926 492 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SERPINC1P01008 464 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TYMPP19971 482 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 LRMPQ12912 555 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PTPN14Q15678 1187 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PSMD5Q16401 504 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 KIAA0319Q5VV43 1072 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 OVOS1Q6IE37 1185 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SCARA5Q6ZMJ2 495 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ADGRF2Q8IZF7 708 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TOP6BLQ8N6T0 577 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 MYLIPQ8WY64 445 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PIK3R5Q8WYR1 880 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 CDX2Q99626 313 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 CRACR2AQ9BSW2 395 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 LMCD1Q9NZU5 365 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 L1RE1Q9UN81 338 aa15.53■□□□□ 0.08
TNFRSF1A-216ENST00000543995 CHD7Q9P2D1 2997 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 GTPBP10A4D1E9 387 aaKnown RBP15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 C2orf71A6NGG8 1288 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 HIDE1A8MVS5 230 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CYP11A1P05108 521 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CREMQ03060 361 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ADGRE1Q14246 886 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 SOWAHAQ2M3V2 549 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CTXN3Q4LDR2 81 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ZNF280DQ6N043 979 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 DPH6Q7L8W6 267 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 GLYCTKQ8IVS8 523 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 THEM5Q8N1Q8 247 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 TMEM86AQ8N2M4 240 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PDCL2Q8N4E4 241 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 MRPL43Q8N983 215 aaKnown RBP15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 EHBP1Q8NDI1 1231 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 LNX1Q8TBB1 728 aaPredicted RBP15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PPP2R3CQ969Q6 453 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 EMILIN2Q9BXX0 1053 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 NIF3L1Q9GZT8 377 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 APOBEC3GQ9HC16 384 aaKnown RBP15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 IRAK3Q9Y616 596 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CHD9Q3L8U1 2897 aa15.52■□□□□ 0.07
TNFRSF1A-216ENST00000543995 RAP1GAPP47736 663 aa15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 EXOC3L4Q17RC7 722 aa15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 FILIP1LQ4L180 1135 aa15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 RBM23Q86U06 439 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 MICALL1Q8N3F8 863 aa15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 TATDN2Q93075 761 aa15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 GUCD1Q96NT3 240 aa15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 NT5C1BQ96P26 610 aa15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 INTS2Q9H0H0 1204 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 NSUN3Q9H649 340 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 SMYD3Q9H7B4 428 aa15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 MTCH2Q9Y6C9 303 aa15.51■□□□□ 0.07
TNFRSF1A-216ENST00000543995 LRRC10BA6NIK2 292 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 LILRB3O75022 631 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 OAZ2O95190 189 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 RPL17P18621 184 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 SLC9A1P19634 815 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ASPAP45381 313 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 LHX1P48742 406 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ARPP19P56211 112 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 UBXN1Q04323 297 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 TRIM65Q6PJ69 517 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 GPR65Q8IYL9 337 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms