RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 C1orf127Q8N9H9 656 aa18.14■□□□□ 0.49
PTPRO-209ENST00000543886 C1orf131Q8NDD1 294 aaKnown RBP18.14■□□□□ 0.49
PTPRO-209ENST00000543886 NEUROG2Q9H2A3 272 aa18.14■□□□□ 0.49
PTPRO-209ENST00000543886 ASB7Q9H672 318 aa18.14■□□□□ 0.49
PTPRO-209ENST00000543886 PCYOX1Q9UHG3 505 aa18.14■□□□□ 0.49
PTPRO-209ENST00000543886 SIX4Q9UIU6 781 aa18.14■□□□□ 0.49
PTPRO-209ENST00000543886 GOLGA6CA6NDK9 693 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 RRN3P2A6NIE6 340 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 TLR3O15455 904 aaKnown RBP18.13■□□□□ 0.49
PTPRO-209ENST00000543886 ITGB3P05106 788 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 GOLGA6DP0CG33 693 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 LMAN1P49257 510 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 CYP1B1Q16678 543 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 WDR72Q3MJ13 1102 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 CCDC137Q6PK04 289 aaKnown RBP18.13■□□□□ 0.49
PTPRO-209ENST00000543886 KIAA0319LQ8IZA0 1049 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 FEZF2Q8TBJ5 459 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 ZNF518BQ9C0D4 1074 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 GOLGA6AQ9NYA3 693 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 KAT6AQ92794 2004 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 TCRBV7S2A1N4TA0A589 114 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 PSTPIP1O43586 416 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 ECM2O94769 699 aaPredicted RBP18.13■□□□□ 0.49
PTPRO-209ENST00000543886 KCTD19Q17RG1 926 aaPredicted RBP18.13■□□□□ 0.49
PTPRO-209ENST00000543886 DUPD1Q68J44 220 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 IQCKQ8N0W5 287 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 FAXDC2Q96IV6 333 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 BCO2Q9BYV7 579 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 IP6K2Q9UHH9 426 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 PCDHGC3Q9UN70 934 aa18.13■□□□□ 0.49
PTPRO-209ENST00000543886 PODXLO00592 558 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 DYNC1LI2O43237 492 aaPredicted RBP18.12■□□□□ 0.49
PTPRO-209ENST00000543886 ADCY6O43306 1168 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 MED7O43513 233 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 RARAP10276 462 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 CD19P15391 556 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 PTGIRP43119 386 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 RAP1GAPP47736 663 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 HUNKP57058 714 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 TMEM132DQ14C87 1099 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 RHOT1Q8IXI2 618 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 CCDC105Q8IYK2 499 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 ZDHHC14Q8IZN3 488 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 MAIP1Q8WWC4 291 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 TFAP2BQ92481 460 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 ACAP3Q96P50 834 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 SETD4Q9NVD3 440 aa18.12■□□□□ 0.49
PTPRO-209ENST00000543886 FSCN2O14926 492 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 MEFVO15553 781 aaPredicted RBP18.11■□□□□ 0.49
PTPRO-209ENST00000543886 P4HA1P13674 534 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 EIF4BP23588 611 aaKnown RBP18.11■□□□□ 0.49
PTPRO-209ENST00000543886 ATICP31939 592 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 MAN1A1P33908 653 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 COILP38432 576 aaPredicted RBP18.11■□□□□ 0.49
PTPRO-209ENST00000543886 SSR1P43307 286 aaKnown RBP18.11■□□□□ 0.49
PTPRO-209ENST00000543886 FNTAP49354 379 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 MAP2K5Q13163 448 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 MTMR3Q13615 1198 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 SLC10A6Q3KNW5 377 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 MORN1Q5T089 497 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 DNAJC24Q6P3W2 148 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 TTC27Q6P3X3 843 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 APBB1IPQ7Z5R6 666 aaPredicted RBP18.11■□□□□ 0.49
PTPRO-209ENST00000543886 C12orf50Q8NA57 414 aaPredicted RBP18.11■□□□□ 0.49
PTPRO-209ENST00000543886 FAM76AQ8TAV0 307 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 PIK3R5Q8WYR1 880 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 USTQ9Y2C2 406 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 A0A1B0GUA9 196 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 CDH5P33151 784 aaPredicted RBP18.11■□□□□ 0.49
PTPRO-209ENST00000543886 HSD17B3P37058 310 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 SIX1Q15475 284 aaPredicted RBP18.11■□□□□ 0.49
PTPRO-209ENST00000543886 KIZQ2M2Z5 673 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 PRAMEF19Q5SWL8 479 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 CST9Q5W186 159 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 CCDC50Q8IVM0 306 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 DDX27Q96GQ7 796 aaKnown RBP18.11■□□□□ 0.49
PTPRO-209ENST00000543886 FMO2Q99518 471 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 FAM49AQ9H0Q0 323 aaPredicted RBP18.11■□□□□ 0.49
PTPRO-209ENST00000543886 LCMT1Q9UIC8 334 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 PLAAQ9Y263 795 aa18.11■□□□□ 0.49
PTPRO-209ENST00000543886 GJB6O95452 261 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 PAEPP09466 180 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 POLR2BP30876 1174 aaKnown RBP18.1■□□□□ 0.49
PTPRO-209ENST00000543886 GBP1P32455 592 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 DRG2P55039 364 aaKnown RBP18.1■□□□□ 0.49
PTPRO-209ENST00000543886 DCAF4L1Q3SXM0 396 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 SGO2Q562F6 1265 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 DAB2IPQ5VWQ8 1189 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 ERICH1Q86X53 443 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 GINS2Q9Y248 185 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 A6NJR5 290 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 SMIM10L2AP0DMW4 78 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 SMIM10L2BP0DMW5 78 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 CDH8P55286 799 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 CDC42EP1Q00587 391 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 TAP1Q03518 808 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 LLGL1Q15334 1064 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 TAF1CQ15572 869 aaPredicted RBP18.1■□□□□ 0.49
PTPRO-209ENST00000543886 DCUN1D2Q6PH85 259 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 TMC3Q7Z5M5 1100 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms