RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 RHBDL2Q9NX52 303 aa20.32■□□□□ 0.84
SUDS3-204ENST00000543473 STX18Q9P2W9 335 aaKnown RBP20.32■□□□□ 0.84
SUDS3-204ENST00000543473 SPDYE16A6NNV3 312 aaPredicted RBP20.31■□□□□ 0.84
SUDS3-204ENST00000543473 E2F6O75461 281 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 ABL1P00519 1130 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 OATP04181 439 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 FGFR2P21802 821 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 ACTR2P61160 394 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 AMPD2Q01433 879 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 ITGB3BPQ13352 177 aaPredicted RBP20.31■□□□□ 0.84
SUDS3-204ENST00000543473 SPDYE2Q495Y8 402 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 ATXN2LQ8WWM7 1075 aaKnown RBP20.31■□□□□ 0.84
SUDS3-204ENST00000543473 SCG3Q8WXD2 468 aaKnown RBP20.31■□□□□ 0.84
SUDS3-204ENST00000543473 PPP1R36Q96LQ0 422 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 RIPK2O43353 540 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 CCDC92Q53HC0 331 aaPredicted RBP20.31■□□□□ 0.84
SUDS3-204ENST00000543473 NDUFAF2Q8N183 169 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 DHX35Q9H5Z1 703 aaKnown RBP20.31■□□□□ 0.84
SUDS3-204ENST00000543473 JMJD4Q9H9V9 463 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 TBC1D23Q9NUY8 699 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 POLLQ9UGP5 575 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 LZTS1Q9Y250 596 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 E7ENQ6 273 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 NEMP1O14524 444 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 YWHABP31946 246 aaKnown RBP20.31■□□□□ 0.84
SUDS3-204ENST00000543473 MAPRE2Q15555 327 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 CHI3L2Q15782 390 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 SWSAP1Q6NVH7 229 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 AGPAT3Q9NRZ7 376 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 NDUFA13Q9P0J0 144 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 PNMA3Q9UL41 463 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 SRRM3A6NNA2 597 aaPredicted RBP20.31■□□□□ 0.84
SUDS3-204ENST00000543473 ENTPD3O75355 529 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 SERPINB9P50453 376 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 PIGHQ14442 188 aaPredicted RBP20.31■□□□□ 0.84
SUDS3-204ENST00000543473 ARL13BQ3SXY8 428 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 TMEM139Q8IV31 216 aa20.31■□□□□ 0.84
SUDS3-204ENST00000543473 POLR3FQ9H1D9 316 aaPredicted RBP20.31■□□□□ 0.84
SUDS3-204ENST00000543473 TNS2Q63HR2 1409 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 PAMP19021 973 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 IL10P22301 178 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 EIF1ADQ8N9N8 165 aaKnown RBP20.3■□□□□ 0.84
SUDS3-204ENST00000543473 SMAPO00193 183 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 CST8O60676 142 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 NDUFB10O96000 172 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 RBP3P10745 1247 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 GPC3P51654 580 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 ARMCX2Q7L311 632 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 OTUD5Q96G74 571 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 AURKCQ9UQB9 309 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 WDR59Q6PJI9 974 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 SCFD1Q8WVM8 642 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 CCT7Q99832 543 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 ZNF70Q9UC06 446 aaPredicted RBP20.3■□□□□ 0.84
SUDS3-204ENST00000543473 PALM3A6NDB9 673 aaPredicted RBP20.3■□□□□ 0.84
SUDS3-204ENST00000543473 APOL1O14791 398 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 ATP9AO75110 1047 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 TNFRSF8P28908 595 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 ATXN3P54252 364 aaPredicted RBP20.3■□□□□ 0.84
SUDS3-204ENST00000543473 NFX1Q12986 1120 aaKnown RBP20.3■□□□□ 0.84
SUDS3-204ENST00000543473 HABP4Q5JVS0 413 aaKnown RBP20.3■□□□□ 0.84
SUDS3-204ENST00000543473 PPIL6Q8IXY8 311 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 RBBP8NLQ8NC74 664 aaPredicted RBP20.3■□□□□ 0.84
SUDS3-204ENST00000543473 TMA16Q96EY4 203 aaKnown RBP20.3■□□□□ 0.84
SUDS3-204ENST00000543473 PPP1R16BQ96T49 567 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 FBXO40Q9UH90 709 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 NAALADL1Q9UQQ1 740 aa20.3■□□□□ 0.84
SUDS3-204ENST00000543473 PMLP29590 882 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 ZNF568Q3ZCX4 644 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 BBS5Q8N3I7 341 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 SNRNP27Q8WVK2 155 aaKnown RBP20.29■□□□□ 0.84
SUDS3-204ENST00000543473 CEP19Q96LK0 163 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 AP5M1Q9H0R1 490 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 SCAF8Q9UPN6 1271 aaKnown RBP20.29■□□□□ 0.84
SUDS3-204ENST00000543473 TRIM49D1C9J1S8 452 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 CALB2P22676 271 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 CACNA2D1P54289 1103 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 DUOXA2Q1HG44 320 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 C3orf67Q6ZVT6 689 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 NSUN6Q8TEA1 469 aaKnown RBP20.29■□□□□ 0.84
SUDS3-204ENST00000543473 MTRQ99707 1265 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 RCCD1A6NED2 376 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 MAN1A2O60476 641 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 FASTKD1Q53R41 847 aaKnown RBP20.29■□□□□ 0.84
SUDS3-204ENST00000543473 ACAD10Q6JQN1 1059 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 PBXIP1Q96AQ6 731 aa20.29■□□□□ 0.84
SUDS3-204ENST00000543473 AKAP3O75969 853 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 COPAP53621 1224 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 HMGCS2P54868 508 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 WASHC2DQ5SRD0 308 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 SCUBE1Q8IWY4 988 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 MREGQ8N565 214 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 TMEM8AQ9HCN3 771 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 ABCF3Q9NUQ8 709 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 SLC4A1P02730 911 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 HDAC4P56524 1084 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 STXBP2Q15833 593 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 SNX30Q5VWJ9 437 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 LDHDQ86WU2 507 aa20.28■□□□□ 0.84
SUDS3-204ENST00000543473 LRCH1Q9Y2L9 728 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms