RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 ALG13Q9NP73 1137 aaKnown RBP25.06■■□□□ 1.6
SHD-201ENST00000543264 HEY2Q9UBP5 337 aa25.06■■□□□ 1.6
SHD-201ENST00000543264 ZBTB21Q9ULJ3 1066 aa25.06■■□□□ 1.6
SHD-201ENST00000543264 PI4K2BG5E9Z4 385 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 GSC2O15499 205 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 GPC3P51654 580 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 POLE2P56282 527 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 PEX3P56589 373 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 ALCAMQ13740 583 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 TMEM179Q6ZVK1 233 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 GMCL1P1Q8NEA9 526 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 COA1Q9GZY4 146 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 AVENQ9NQS1 362 aaPredicted RBP25.05■■□□□ 1.6
SHD-201ENST00000543264 PI4KBQ9UBF8 816 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 GYG2O15488 501 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 ABCB5Q2M3G0 1257 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 ANKMY2Q8IV38 441 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 FAM84AQ96KN4 292 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 WDR35Q9P2L0 1181 aa25.05■■□□□ 1.6
SHD-201ENST00000543264 HNRNPCL1O60812 293 aaKnown RBP25.04■■□□□ 1.6
SHD-201ENST00000543264 BANF1O75531 89 aa25.04■■□□□ 1.6
SHD-201ENST00000543264 HAUS5O94927 633 aa25.04■■□□□ 1.6
SHD-201ENST00000543264 ATP13A4Q4VNC1 1196 aa25.04■■□□□ 1.6
SHD-201ENST00000543264 SAMD1Q6SPF0 538 aaPredicted RBP25.04■■□□□ 1.6
SHD-201ENST00000543264 SCYL3Q8IZE3 742 aa25.04■■□□□ 1.6
SHD-201ENST00000543264 TMEM8AQ9HCN3 771 aa25.04■■□□□ 1.6
SHD-201ENST00000543264 GPRC5CQ9NQ84 441 aa25.04■■□□□ 1.6
SHD-201ENST00000543264 CETN2P41208 172 aa25.04■■□□□ 1.6
SHD-201ENST00000543264 NSFP46459 744 aaKnown RBP25.04■■□□□ 1.6
SHD-201ENST00000543264 MIER3Q7Z3K6 550 aa25.04■■□□□ 1.6
SHD-201ENST00000543264 VPS52Q8N1B4 723 aa25.04■■□□□ 1.6
SHD-201ENST00000543264 MCUR1Q96AQ8 359 aa25.04■■□□□ 1.6
SHD-201ENST00000543264 PSMC3IPQ9P2W1 217 aaPredicted RBP25.04■■□□□ 1.6
SHD-201ENST00000543264 UMODL1Q5DID0 1318 aa25.04■■□□□ 1.6
SHD-201ENST00000543264 GOLGA8SH3BPF8 625 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 GOLGA8MH3BSY2 632 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 GOLGA8RI6L899 631 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 TBX10O75333 385 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 ZWINTO95229 277 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 SSTR3P32745 418 aaPredicted RBP25.03■■□□□ 1.6
SHD-201ENST00000543264 GTF2BQ00403 316 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 PTP4A2Q12974 167 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 PDIA2Q13087 525 aaKnown RBP25.03■■□□□ 1.6
SHD-201ENST00000543264 LRRC74BQ6ZQY2 392 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 CERKQ8TCT0 537 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 COQ4Q9Y3A0 265 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 TMEM150BA6NC51 233 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 PSTPIP1O43586 416 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 MAPTP10636 758 aaKnown RBP25.03■■□□□ 1.6
SHD-201ENST00000543264 SLC34A1Q06495 639 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 HHIPL2Q6UWX4 724 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 LARGE2Q8N3Y3 721 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 NSL1Q96IY1 281 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 ZC3H12CQ9C0D7 883 aaKnown RBP25.03■■□□□ 1.6
SHD-201ENST00000543264 MYPNQ86TC9 1320 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 ZNF831Q5JPB2 1677 aa25.03■■□□□ 1.6
SHD-201ENST00000543264 ADAMTSL1Q8N6G6 1762 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 LIASO43766 372 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 RXRBP28702 533 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 GCLCP48506 637 aaPredicted RBP25.02■■□□□ 1.6
SHD-201ENST00000543264 JAG1P78504 1218 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 ZBTB16Q05516 673 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 SH3BP5LQ7L8J4 393 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 KATNAL2Q8IYT4 538 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.02■■□□□ 1.6
SHD-201ENST00000543264 TMEM174Q8WUU8 243 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 PRR11Q96HE9 360 aaPredicted RBP25.02■■□□□ 1.6
SHD-201ENST00000543264 KLF6Q99612 283 aaPredicted RBP25.02■■□□□ 1.6
SHD-201ENST00000543264 C11orf70Q9BRQ4 267 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.02■■□□□ 1.6
SHD-201ENST00000543264 PSMG1O95456 288 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 ATF7P17544 494 aaPredicted RBP25.02■■□□□ 1.6
SHD-201ENST00000543264 OCRLQ01968 901 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 EFTUD2Q15029 972 aaKnown RBP eCLIP25.02■■□□□ 1.6
SHD-201ENST00000543264 SV2AQ7L0J3 742 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 ZNF398Q8TD17 642 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 WDR60Q8WVS4 1066 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 PTCD3Q96EY7 689 aaKnown RBP25.02■■□□□ 1.6
SHD-201ENST00000543264 TRIM4Q9C037 500 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 ZHX2Q9Y6X8 837 aa25.02■■□□□ 1.6
SHD-201ENST00000543264 ALOX15BO15296 676 aa25.01■■□□□ 1.6
SHD-201ENST00000543264 KCNA3P22001 575 aa25.01■■□□□ 1.6
SHD-201ENST00000543264 CRKP46108 304 aa25.01■■□□□ 1.6
SHD-201ENST00000543264 B3GNT9Q6UX72 402 aa25.01■■□□□ 1.6
SHD-201ENST00000543264 PASD1Q8IV76 773 aa25.01■■□□□ 1.6
SHD-201ENST00000543264 TCP10LQ8TDR4 215 aa25.01■■□□□ 1.6
SHD-201ENST00000543264 STMN2Q93045 179 aa25.01■■□□□ 1.6
SHD-201ENST00000543264 FBXO6Q9NRD1 293 aaPredicted RBP25.01■■□□□ 1.6
SHD-201ENST00000543264 SLC24A2Q9UI40 661 aa25.01■■□□□ 1.6
SHD-201ENST00000543264 GH2P01242 217 aa25.01■■□□□ 1.59
SHD-201ENST00000543264 RARRES1P49788 294 aa25.01■■□□□ 1.59
SHD-201ENST00000543264 RBM5P52756 815 aaKnown RBP eCLIP25.01■■□□□ 1.59
SHD-201ENST00000543264 CACNA2D1P54289 1103 aa25.01■■□□□ 1.59
SHD-201ENST00000543264 NFX1Q12986 1120 aaKnown RBP25.01■■□□□ 1.59
SHD-201ENST00000543264 RINLQ6ZS11 566 aa25.01■■□□□ 1.59
SHD-201ENST00000543264 RFX8Q6ZV50 586 aa25.01■■□□□ 1.59
SHD-201ENST00000543264 LRRC6Q86X45 466 aa25.01■■□□□ 1.59
SHD-201ENST00000543264 EXD1Q8NHP7 514 aa25.01■■□□□ 1.59
SHD-201ENST00000543264 TRIM55Q9BYV6 548 aa25.01■■□□□ 1.59
SHD-201ENST00000543264 SERPINB3P29508 390 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms