RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 ASAP3Q8TDY4 903 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 PIGOQ8TEQ8 1089 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 PARD3BQ8TEW8 1205 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 LEO1Q8WVC0 666 aaPredicted RBP5.62□□□□□ -1.51
CLIP1-217ENST00000543205 SLC7A3Q8WY07 619 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 SKA1Q96BD8 255 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 TRIM43Q96BQ3 446 aaPredicted RBP5.62□□□□□ -1.51
CLIP1-217ENST00000543205 MPP4Q96JB8 637 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 CHAMP1Q96JM3 812 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 CLUHP3Q96NS8 147 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 PLIN2Q99541 437 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 KRTAP4-12Q9BQ66 201 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 JPH2Q9BR39 696 aaPredicted RBP5.62□□□□□ -1.51
CLIP1-217ENST00000543205 SH2D3AQ9BRG2 576 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 MMTAG2Q9BU76 263 aaKnown RBP5.62□□□□□ -1.51
CLIP1-217ENST00000543205 LACRTQ9GZZ8 138 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 FAM49AQ9H0Q0 323 aaPredicted RBP5.62□□□□□ -1.51
CLIP1-217ENST00000543205 SUGCTQ9HAC7 445 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 ZMYND8Q9ULU4 1186 aaPredicted RBP5.62□□□□□ -1.51
CLIP1-217ENST00000543205 PCDHA7Q9UN72 937 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 TRIM33Q9UPN9 1127 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 PCDHA2Q9Y5H9 948 aa5.62□□□□□ -1.51
CLIP1-217ENST00000543205 SMIM35A0A1B0GVV1 85 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 ARHGEF35A5YM69 484 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 M0QZ92 97 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 RHOBTB3O94955 611 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 C22orf31O95567 290 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 TIMP1P01033 207 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 DNM2P50570 870 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 POLGP54098 1239 aaPredicted RBP5.61□□□□□ -1.51
CLIP1-217ENST00000543205 PWP1Q13610 501 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 KARSQ15046 597 aaKnown RBP5.61□□□□□ -1.51
CLIP1-217ENST00000543205 TARBP2Q15633 366 aaKnown RBP5.61□□□□□ -1.51
CLIP1-217ENST00000543205 PPP2R5EQ16537 467 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 FXNQ16595 210 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 EFCAB12Q6NXP0 572 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 C16orf54Q6UWD8 224 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 C6orf15Q6UXA7 325 aaPredicted RBP5.61□□□□□ -1.51
CLIP1-217ENST00000543205 RUFY4Q6ZNE9 571 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 C20orf204Q6ZNR8 217 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 PASD1Q8IV76 773 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 SLITRK4Q8IW52 837 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 TMEM102Q8N9M5 508 aaPredicted RBP5.61□□□□□ -1.51
CLIP1-217ENST00000543205 ZSWIM2Q8NEG5 633 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 PPHLN1Q8NEY8 458 aaKnown RBP5.61□□□□□ -1.51
CLIP1-217ENST00000543205 NKD1Q969G9 470 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 ZBTB10Q96DT7 871 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 EPSTI1Q96J88 318 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 CTAGE1Q96RT6 745 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 MAP7D2Q96T17 732 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 LBHD1Q9BQE6 289 aaPredicted RBP5.61□□□□□ -1.51
CLIP1-217ENST00000543205 CCSER1Q9C0I3 900 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 PLCB1Q9NQ66 1216 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 DBR1Q9UK59 544 aaKnown RBP5.61□□□□□ -1.51
CLIP1-217ENST00000543205 TBX21Q9UL17 535 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 AKT3Q9Y243 479 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 PCDHGB3Q9Y5G1 929 aa5.61□□□□□ -1.51
CLIP1-217ENST00000543205 GOLGA6L4A6NEF3 574 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 RSPH10B2B2RC85 870 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 E9PMD0 336 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 MAFO75444 373 aaPredicted RBP5.6□□□□□ -1.51
CLIP1-217ENST00000543205 AGR2O95994 175 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 RSPH10BP0C881 870 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 CKBP12277 381 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 SELPP16109 830 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 CYP2C18P33260 490 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 RARRES1P49788 294 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 CLCN3P51790 818 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 CCL23P55773 120 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 GRB10Q13322 594 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 EMC2Q15006 297 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 TMEM119Q4V9L6 283 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 HYIQ5T013 277 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 FOXB2Q5VYV0 432 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 RRAGBQ5VZM2 374 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 LRRC71Q8N4P6 559 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 TMEM199Q8N511 208 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 COG1Q8WTW3 980 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 DNAJB3Q8WWF6 145 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 TCP11Q8WWU5 503 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 PANK2Q9BZ23 570 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 BHMT2Q9H2M3 363 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 ATP6V0A4Q9HBG4 840 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 IP6K2Q9UHH9 426 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 TRHDEQ9UKU6 1024 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 MAPRE3Q9UPY8 281 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 UMODL1Q5DID0 1318 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 METTL12A8MUP2 240 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 GAS2O43903 313 aaKnown RBP5.6□□□□□ -1.51
CLIP1-217ENST00000543205 USO1O60763 962 aaKnown RBP5.6□□□□□ -1.51
CLIP1-217ENST00000543205 PLA2G4BP0C869 781 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 PLCG1P19174 1290 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 ITGB8P26012 769 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 STAT6P42226 847 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 RENBPP51606 427 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 MRPS6P82932 125 aaKnown RBP5.6□□□□□ -1.51
CLIP1-217ENST00000543205 CDC42EP1Q00587 391 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 FPGSQ05932 587 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 TMEM62Q0P6H9 643 aa5.6□□□□□ -1.51
CLIP1-217ENST00000543205 TRIM71Q2Q1W2 868 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms