RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 VNN2O95498 520 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 POLR2BP30876 1174 aaKnown RBP16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 ARPP19P56211 112 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 FAM160A1Q05DH4 1040 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 CYP24A1Q07973 514 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 MYBPC2Q14324 1141 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 PSMD6Q15008 389 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 DUOXA2Q1HG44 320 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 SV2CQ496J9 727 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 WDR49Q8IV35 697 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 RDH13Q8NBN7 331 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 EDAQ92838 391 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 ACSF2Q96CM8 615 aaPredicted RBP16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 ZNF560Q96MR9 790 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 MTMR12Q9C0I1 747 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 PIDD1Q9HB75 910 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 DSEQ9UL01 958 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 AGAP1Q9UPQ3 857 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 CCL16O15467 120 aa16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 XYLBO75191 536 aa16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 RBP5P82980 135 aa16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 GPR17Q13304 367 aa16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 PTPN21Q16825 1174 aa16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 LMBRD2Q68DH5 695 aaPredicted RBP16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 RNF19BQ6ZMZ0 732 aa16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 GRASPQ7Z6J2 395 aaPredicted RBP16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 CCDC47Q96A33 483 aaKnown RBP16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 TIGD1Q96MW7 591 aa16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 RTP3Q9BQQ7 232 aa16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 GDAP2Q9NXN4 497 aa16.66■□□□□ 0.26
ECHDC2-223ENST00000542552 TECTAO75443 2155 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 TMEM191BP0C7N4 346 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 ELF1P32519 619 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 ZXDAP98168 799 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 ADCY1Q08828 1119 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 PNOCQ13519 176 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 WSCD1Q658N2 575 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 LIMS2Q7Z4I7 341 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 GUF1Q8N442 669 aaKnown RBP16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 OR10T2Q8NGX3 314 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 SPATA20Q8TB22 786 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 CCDC34Q96HJ3 373 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 ANKRD36BP1Q96IX9 119 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 MYADMQ96S97 322 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 CGRRF1Q99675 332 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 CYP4F11Q9HBI6 524 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 EPS15L1Q9UBC2 864 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 LIMD1Q9UGP4 676 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 TRAF3IP3Q9Y228 551 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 INSL5Q9Y5Q6 135 aa16.65■□□□□ 0.26
ECHDC2-223ENST00000542552 PRRG1O14668 218 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 EXOC3O60645 756 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 PRPF40AO75400 957 aaKnown RBP16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 KIF20AO95235 890 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 TNNC2P02585 160 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 OR4Q2P0C623 313 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 CPB1P15086 417 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 FSHRP23945 695 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 CLDN10P78369 228 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 NTHL1P78549 312 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 NFIL3Q16649 462 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 TMEM31Q5JXX7 168 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 TRAPPC11Q7Z392 1133 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 ELOA2Q8IYF1 753 aaPredicted RBP16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 PLEKHO2Q8TD55 490 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 ZNF516Q92618 1163 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 TMEM209Q96SK2 561 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 LRFN3Q9BTN0 628 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 ZCWPW1Q9H0M4 648 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 AVENQ9NQS1 362 aaPredicted RBP16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 HCFC1R1Q9NWW0 138 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 CHMP5Q9NZZ3 219 aa16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 DNMT3BQ9UBC3 853 aaKnown RBP16.64■□□□□ 0.25
ECHDC2-223ENST00000542552 TULP1O00294 542 aaPredicted RBP16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 NR3C1P04150 777 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 KRT19P08727 400 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 DLATP10515 647 aaKnown RBP16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 CENPPQ6IPU0 288 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 METTL23Q86XA0 190 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 PDCL2Q8N4E4 241 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 PARD3BQ8TEW8 1205 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 CCDC127Q96BQ5 260 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 FNBP1Q96RU3 617 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 CRISPLD1Q9H336 500 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 HSFX1Q9UBD0 423 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 L1RE1Q9UN81 338 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 SORCS3Q9UPU3 1222 aa16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 ZFP37Q9Y6Q3 630 aaPredicted RBP16.63■□□□□ 0.25
ECHDC2-223ENST00000542552 MTMR11A4FU01 709 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 FAM86C2PA6NEL3 165 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 PRR33A8MZF0 331 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 CALUO43852 315 aaPredicted RBP16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 GADD45BO75293 160 aaPredicted RBP16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 CST3P01034 146 aaPredicted RBP16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 LRG1P02750 347 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 ASGR2P07307 311 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 LAMP2P13473 410 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 TNNI1P19237 187 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms