RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 KDM3BQ7LBC6 1761 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 YDJCA8MPS7 323 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 IGF2BP3O00425 579 aaKnown RBP eCLIP16.96■□□□□ 0.31
VARS2-212ENST00000542001 VTNP04004 478 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 PHKA2P46019 1235 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 MMP19Q99542 508 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 ASNSD1Q9NWL6 643 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 XPO7Q9UIA9 1087 aaKnown RBP16.96■□□□□ 0.31
VARS2-212ENST00000542001 BANF1O75531 89 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 KRT7P08729 469 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 KRT4P19013 534 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 TARSP26639 723 aaKnown RBP16.96■□□□□ 0.31
VARS2-212ENST00000542001 ANXA13P27216 316 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 ROR1Q01973 937 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 LRRC36Q1X8D7 754 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 ATF7IP2Q5U623 682 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 LVRNQ6Q4G3 990 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 MFSD7Q6UXD7 560 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 SMC1BQ8NDV3 1235 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 CDKL2Q92772 493 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 CPB2Q96IY4 423 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 CEP41Q9BYV8 373 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 KLHL8Q9P2G9 620 aaPredicted RBP16.96■□□□□ 0.31
VARS2-212ENST00000542001 GTPBP10A4D1E9 387 aaKnown RBP16.96■□□□□ 0.3
VARS2-212ENST00000542001 VWA5AO00534 786 aa16.96■□□□□ 0.3
VARS2-212ENST00000542001 ATP9BO43861 1147 aa16.96■□□□□ 0.3
VARS2-212ENST00000542001 PPFIA2O75334 1257 aa16.96■□□□□ 0.3
VARS2-212ENST00000542001 UBOX5O94941 541 aa16.96■□□□□ 0.3
VARS2-212ENST00000542001 NETO2Q8NC67 525 aa16.96■□□□□ 0.3
VARS2-212ENST00000542001 ZNF606Q8WXB4 792 aa16.96■□□□□ 0.3
VARS2-212ENST00000542001 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.96■□□□□ 0.3
VARS2-212ENST00000542001 TXLNGQ9NUQ3 528 aa16.96■□□□□ 0.3
VARS2-212ENST00000542001 CXCL8P10145 99 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 ATXN3P54252 364 aaPredicted RBP16.95■□□□□ 0.3
VARS2-212ENST00000542001 RYBPQ8N488 228 aaPredicted RBP16.95■□□□□ 0.3
VARS2-212ENST00000542001 ATP11CQ8NB49 1132 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 ACTL9Q8TC94 416 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 CISHQ9NSE2 258 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 IQANK1A0A1B0GTG1 560 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 OSBPP22059 807 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 SSTR1P30872 391 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 PCNX4Q63HM2 1172 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 TRMT10CQ7L0Y3 403 aaKnown RBP16.95■□□□□ 0.3
VARS2-212ENST00000542001 TEX2Q8IWB9 1127 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 C4orf19Q8IY42 314 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 MCOLN2Q8IZK6 566 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 IQCKQ8N0W5 287 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 ARHGAP24Q8N264 748 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 EXT2Q93063 718 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 A1CFQ9NQ94 594 aaKnown RBP16.95■□□□□ 0.3
VARS2-212ENST00000542001 COG5Q9UP83 839 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 FAM47DPA6NHR8 397 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 KRT37O76014 449 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 RARGP13631 454 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 PRKCIP41743 596 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 C11orf63Q6NUN7 778 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 C15orf52Q6ZUT6 534 aaKnown RBP16.95■□□□□ 0.3
VARS2-212ENST00000542001 CCDC125Q86Z20 511 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 NIF3L1Q9GZT8 377 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 KLC2Q9H0B6 622 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 DNPEPQ9ULA0 475 aa16.95■□□□□ 0.3
VARS2-212ENST00000542001 TPX2Q9ULW0 747 aaKnown RBP16.95■□□□□ 0.3
VARS2-212ENST00000542001 C5P01031 1676 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 CYP3A7-CYP3A51PA0A087WV96 503 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 OPHN1O60890 802 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 NPTXRO95502 500 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 CYP3A7P24462 503 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 CDC25CP30307 473 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 SLC1A1P43005 524 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 ARFIP2P53365 341 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 RPL7AP62424 266 aaKnown RBP16.94■□□□□ 0.3
VARS2-212ENST00000542001 OTUD4Q01804 1114 aaKnown RBP16.94■□□□□ 0.3
VARS2-212ENST00000542001 TFDP2Q14188 446 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 CEP120Q8N960 986 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 MORC4Q8TE76 937 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 P2RX7Q99572 595 aaKnown RBP16.94■□□□□ 0.3
VARS2-212ENST00000542001 POLIQ9UNA4 740 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 L3MBTL1Q9Y468 752 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 DYNC1LI2O43237 492 aaPredicted RBP16.94■□□□□ 0.3
VARS2-212ENST00000542001 GZMAP12544 262 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 SCTRP47872 440 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 CTCFP49711 727 aaPredicted RBP16.94■□□□□ 0.3
VARS2-212ENST00000542001 TTLL4Q14679 1199 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 STAT4Q14765 748 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 SGSM1Q2NKQ1 1148 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 TRIM72Q6ZMU5 477 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 OR5B17Q8NGF7 314 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 CCHCR1Q8TD31 782 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 KREMEN1Q96MU8 473 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 NAALADL1Q9UQQ1 740 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 ARL2BPQ9Y2Y0 163 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 MOCS2O96007 188 aaPredicted RBP16.94■□□□□ 0.3
VARS2-212ENST00000542001 MROH9Q5TGP6 573 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 CYB5D1Q6P9G0 228 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 RCOR2Q8IZ40 523 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 STRIP2Q9ULQ0 834 aa16.94■□□□□ 0.3
VARS2-212ENST00000542001 CHD2O14647 1828 aaKnown RBP16.93■□□□□ 0.3
VARS2-212ENST00000542001 RIPK2O43353 540 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 CTSHP09668 335 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms