RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 SPATA18Q8TC71 538 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 SEPT1Q8WYJ6 367 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 ROPN1BQ9BZX4 212 aaPredicted RBP15.26■□□□□ 0.03
GCFC2-211ENST00000541687 C10orf88Q9H8K7 445 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 ROPN1Q9HAT0 212 aaPredicted RBP15.26■□□□□ 0.03
GCFC2-211ENST00000541687 IFT122Q9HBG6 1241 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 GGA3Q9NZ52 723 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 WNT10BO00744 389 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 SH3BP5O60239 455 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 SMIM24O75264 130 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 PIAS1O75925 651 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 ITKQ08881 620 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 C11orf63Q6NUN7 778 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 DCDC2CA8MYV0 355 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 CREB3O43889 395 aa15.26■□□□□ 0.03
GCFC2-211ENST00000541687 NLRP11P59045 1033 aaKnown RBP15.26■□□□□ 0.03
GCFC2-211ENST00000541687 XPO7Q9UIA9 1087 aaKnown RBP15.26■□□□□ 0.03
GCFC2-211ENST00000541687 UBOX5O94941 541 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 OATP04181 439 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 PHKA2P46019 1235 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 CLEC16AQ2KHT3 1053 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 LVRNQ6Q4G3 990 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 SYDE1Q6ZW31 735 aaPredicted RBP15.25■□□□□ 0.03
GCFC2-211ENST00000541687 MCOLN2Q8IZK6 566 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 MSL3Q8N5Y2 521 aaKnown RBP15.25■□□□□ 0.03
GCFC2-211ENST00000541687 AGR3Q8TD06 166 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 KIF12Q96FN5 646 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 DDX56Q9NY93 547 aaKnown RBP15.25■□□□□ 0.03
GCFC2-211ENST00000541687 E2F8A0AVK6 867 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 RBAK-RBAKDNI3L0D1 243 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 FDX1P10109 184 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 CLK2P49760 499 aaKnown RBP15.25■□□□□ 0.03
GCFC2-211ENST00000541687 MYL6P60660 151 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 SGSM1Q2NKQ1 1148 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 CCDC125Q86Z20 511 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 PRPF31Q8WWY3 499 aaKnown RBP15.25■□□□□ 0.03
GCFC2-211ENST00000541687 HES6Q96HZ4 224 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 NUDCD1Q96RS6 583 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 SMYD3Q9H7B4 428 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 SNX9Q9Y5X1 595 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 ZNF142P52746 1687 aaPredicted RBP15.25■□□□□ 0.03
GCFC2-211ENST00000541687 LOC102724159A0A0B4J2E5 919 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 LCA5LO95447 670 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 ZSCAN5DPP0CG00 497 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 KRT4P19013 534 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 RAD23BP54727 409 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 PWP2Q15269 919 aaKnown RBP15.25■□□□□ 0.03
GCFC2-211ENST00000541687 AP1ARQ63HQ0 302 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 DTX3LQ8TDB6 740 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 VPS11Q9H270 941 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 ELP3Q9H9T3 547 aa15.25■□□□□ 0.03
GCFC2-211ENST00000541687 METTL5Q9NRN9 209 aaKnown RBP15.25■□□□□ 0.03
GCFC2-211ENST00000541687 CFAP73A6NFT4 308 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 KIAA0391O15091 583 aaKnown RBP15.24■□□□□ 0.03
GCFC2-211ENST00000541687 EFNA5P52803 228 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 ATP13A4Q4VNC1 1196 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 NIF3L1Q9GZT8 377 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 CES2O00748 559 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 TRAPPC3O43617 180 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 PROSCO94903 275 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 TTC4O95801 387 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 TCF7P36402 384 aaPredicted RBP15.24■□□□□ 0.03
GCFC2-211ENST00000541687 RAP1GAPP47736 663 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 SESN2P58004 480 aaPredicted RBP15.24■□□□□ 0.03
GCFC2-211ENST00000541687 RNASELQ05823 741 aaKnown RBP15.24■□□□□ 0.03
GCFC2-211ENST00000541687 SLC15A2Q16348 729 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 UGCGQ16739 394 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 SERPINB12Q96P63 405 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 MUTP22033 750 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 TARSP26639 723 aaKnown RBP15.24■□□□□ 0.03
GCFC2-211ENST00000541687 MARSP56192 900 aaKnown RBP15.24■□□□□ 0.03
GCFC2-211ENST00000541687 GPRASP2Q96D09 838 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 NAALADL1Q9UQQ1 740 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 INPP5FQ9Y2H2 1132 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 PCDHA3Q9Y5H8 950 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 TCRBV7S2A1N4TA0A589 114 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 CCDC78A2IDD5 438 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 IREB2P48200 963 aaKnown RBP15.24■□□□□ 0.03
GCFC2-211ENST00000541687 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 CRLF3Q8IUI8 442 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 SIX6OS1Q8N1H7 587 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 ZSWIM2Q8NEG5 633 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 NOD2Q9HC29 1040 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 SLC24A3Q9HC58 644 aa15.24■□□□□ 0.03
GCFC2-211ENST00000541687 DUOX1Q9NRD9 1551 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 A8MXQ7 604 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 M0QZ92 97 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 PDGFRBP09619 1106 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 LCP1P13796 627 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 CTCFP49711 727 aaPredicted RBP15.23■□□□□ 0.03
GCFC2-211ENST00000541687 CLCN3P51790 818 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 PIGHQ14442 188 aaPredicted RBP15.23■□□□□ 0.03
GCFC2-211ENST00000541687 SAE1Q9UBE0 346 aaPredicted RBP15.23■□□□□ 0.03
GCFC2-211ENST00000541687 PARP4Q9UKK3 1724 aaKnown RBP15.23■□□□□ 0.03
GCFC2-211ENST00000541687 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 TTC36A6NLP5 189 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 KRT38O76015 456 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 PGK2P07205 417 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 OSBPP22059 807 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 EPHB1P54762 984 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms