RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 RAB20Q9NX57 234 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 ZMYND8Q9ULU4 1186 aaPredicted RBP7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 SIK3Q9Y2K2 1263 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 IPPQ9Y573 584 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 DNMT3AQ9Y6K1 912 aaPredicted RBP7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 EVPLQ92817 2033 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 TTC26A0AVF1 554 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 H0YGN5 161 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 MFAP3LO75121 409 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 RECQL4O94761 1208 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 PARNO95453 639 aaKnown RBP7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 HLA-DRAP01903 254 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 C4BPAP04003 597 aaKnown RBP7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 GYPCP04921 128 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 ACTN1P12814 892 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 ADKP55263 362 aaKnown RBP7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 POLR2FP61218 127 aaKnown RBP7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 CLDN10P78369 228 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 ZBED6P86452 979 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 APBA1Q02410 837 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 GOLGA8FQ08AF8 430 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 GOLGA8DPQ0D2H9 430 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 TBX2Q13207 712 aaPredicted RBP7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 CLN3Q13286 438 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 NCOA4Q13772 614 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 RAPGEF1Q13905 1077 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 KLHDC7AQ5VTJ3 777 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 MFSD5Q6N075 450 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 TRIM65Q6PJ69 517 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 RRAGAQ7L523 313 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 TRAPPC11Q7Z392 1133 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 DEFB128Q7Z7B8 93 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 NT5DC4Q86YG4 428 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 LRRC8AQ8IWT6 810 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 TMEM199Q8N511 208 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 SMG8Q8ND04 991 aaKnown RBP7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 OR5B17Q8NGF7 314 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 OR8K1Q8NGG5 319 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 WHAMMQ8TF30 809 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 BADQ92934 168 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 SCLYQ96I15 445 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 FAM84AQ96KN4 292 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 ZNF830Q96NB3 372 aaPredicted RBP7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 SPAG5Q96R06 1193 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 RPS6KC1Q96S38 1066 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 LBHD1Q9BQE6 289 aaPredicted RBP7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 FTHL17Q9BXU8 183 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 OSBPL7Q9BZF2 842 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 EDEM3Q9BZQ6 932 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 MTMR12Q9C0I1 747 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 WNT8AQ9H1J5 351 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 TMX1Q9H3N1 280 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 UBE2TQ9NPD8 197 aaPredicted RBP7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 PLCB1Q9NQ66 1216 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 KLK14Q9P0G3 267 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 CEP72Q9P209 647 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 DNAJC12Q9UKB3 198 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 CAPN11Q9UMQ6 739 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 UMODL1Q5DID0 1318 aa7.15□□□□□ -1.26
CLTCL1-206ENST00000540896 A0A0U1RQF3 1178 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 A0A1W2PQJ5 194 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 PMM2O15305 246 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 XPOTO43592 962 aaKnown RBP7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 NBNO60934 754 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 ZNF623O75123 536 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 ITGB3P05106 788 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 NFICP08651 508 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 UCHL3P15374 230 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 CSF2RAP15509 400 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 RHOQP17081 205 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 RFC2P35250 354 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 IRS1P35568 1242 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 USP8P40818 1118 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 FXR1P51114 621 aaKnown RBP eCLIP7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 MFAP3P55082 362 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 RBP5P82980 135 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 ARID5AQ03989 594 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 FPGSQ05932 587 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 PTPRJQ12913 1337 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 DSC3Q14574 896 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 MBTPS1Q14703 1052 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 ARHGAP44Q17R89 818 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 SGSM1Q2NKQ1 1148 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 ZACNQ401N2 412 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 EPC2Q52LR7 807 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 FIGNQ5HY92 759 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 GLRA4Q5JXX5 417 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 SFMBT2Q5VUG0 894 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 TDRD10Q5VZ19 366 aaKnown RBP7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 C15orf39Q6ZRI6 1047 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 SLC24A5Q71RS6 500 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 MRPL10Q7Z7H8 261 aaKnown RBP7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 RPUSD2Q8IZ73 545 aaKnown RBP7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 PPM1KQ8N3J5 372 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 DBF4BQ8NFT6 615 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 BEST2Q8NFU1 509 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 SEMA4DQ92854 862 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 APBB2Q92870 758 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 LPPQ93052 612 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 ZNF837Q96EG3 531 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms