RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 CALML4Q96GE6 196 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 FIZ1Q96SL8 496 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 MSTO1Q9BUK6 570 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 TRPV4Q9HBA0 871 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 SLC27A5Q9Y2P5 690 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 NCOR2Q9Y618 2525 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 ARNTLO00327 626 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 SLC26A4O43511 780 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 XPOTO43592 962 aaKnown RBP17.63■□□□□ 0.41
TRIM65-203ENST00000540812 LILRB5O75023 590 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 SOAT2O75908 522 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 NFICP08651 508 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 PLCG1P19174 1290 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 TYMPP19971 482 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 NMT1P30419 496 aaKnown RBP17.63■□□□□ 0.41
TRIM65-203ENST00000540812 LILRA4P59901 499 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 GPR17Q13304 367 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 STXBP5Q5T5C0 1151 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 CENPPQ6IPU0 288 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 GPIHBP1Q8IV16 184 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 MFSD6LQ8IWD5 586 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 ATAD1Q8NBU5 361 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 DEPDC1BQ8WUY9 529 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 FAM3CQ92520 227 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 SENP8Q96LD8 212 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 OXCT2Q9BYC2 517 aaPredicted RBP17.63■□□□□ 0.41
TRIM65-203ENST00000540812 CHRDQ9H2X0 955 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 ZHX3Q9H4I2 956 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 SLITRK6Q9H5Y7 841 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 TRPV5Q9NQA5 729 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 CPSF3Q9UKF6 684 aaKnown RBP17.63■□□□□ 0.41
TRIM65-203ENST00000540812 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.63■□□□□ 0.41
TRIM65-203ENST00000540812 PIAS3Q9Y6X2 628 aa17.63■□□□□ 0.41
TRIM65-203ENST00000540812 MTMR11A4FU01 709 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 TISP43B9A030 160 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 ANKRD63C9JTQ0 380 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 MAN2B1O00754 1011 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 ZNF263O14978 683 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 TRAK2O60296 914 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 TDGF1P13385 188 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 CDR1P51861 262 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 PLD1Q13393 1074 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 MYBPC2Q14324 1141 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 KYAT1Q16773 422 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 C9orf57Q5W0N0 161 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 LMAN1LQ9HAT1 526 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 SMG5Q9UPR3 1016 aaKnown RBP17.62■□□□□ 0.41
TRIM65-203ENST00000540812 SMC3Q9UQE7 1217 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 TICRRQ7Z2Z1 1910 aa17.62■□□□□ 0.41
TRIM65-203ENST00000540812 PIRO00625 290 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 KRT18P05783 430 aaKnown RBP17.61■□□□□ 0.41
TRIM65-203ENST00000540812 ALDH1A3P47895 512 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 ACOT2P49753 483 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 EPHB3P54753 998 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 GTF2BQ00403 316 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 LARP1BQ659C4 914 aaKnown RBP17.61■□□□□ 0.41
TRIM65-203ENST00000540812 DGLUCYQ7Z3D6 616 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 DNAJB7Q7Z6W7 309 aaPredicted RBP17.61■□□□□ 0.41
TRIM65-203ENST00000540812 OR10T2Q8NGX3 314 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 RASSF8Q8NHQ8 419 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 BORCS6Q96GS4 357 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 LRRC3BQ96PB8 259 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 TSPAN18Q96SJ8 248 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 MKNK1Q9BUB5 465 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 EPC1Q9H2F5 836 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 IKZF4Q9H2S9 585 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 NCDNQ9UBB6 729 aa17.61■□□□□ 0.41
TRIM65-203ENST00000540812 MED19A0JLT2 244 aaPredicted RBP17.6■□□□□ 0.41
TRIM65-203ENST00000540812 TBCAO75347 108 aaKnown RBP17.6■□□□□ 0.41
TRIM65-203ENST00000540812 ODC1P11926 461 aa17.6■□□□□ 0.41
TRIM65-203ENST00000540812 SCP2P22307 547 aa17.6■□□□□ 0.41
TRIM65-203ENST00000540812 CCNE1P24864 410 aa17.6■□□□□ 0.41
TRIM65-203ENST00000540812 LONP1P36776 959 aaKnown RBP17.6■□□□□ 0.41
TRIM65-203ENST00000540812 GAS6Q14393 721 aa17.6■□□□□ 0.41
TRIM65-203ENST00000540812 TMEM132DQ14C87 1099 aa17.6■□□□□ 0.41
TRIM65-203ENST00000540812 SF3A1Q15459 793 aaKnown RBP17.6■□□□□ 0.41
TRIM65-203ENST00000540812 ZC2HC1CQ53FD0 456 aaPredicted RBP17.6■□□□□ 0.41
TRIM65-203ENST00000540812 GAREM2Q75VX8 874 aa17.6■□□□□ 0.41
TRIM65-203ENST00000540812 CD302Q8IX05 232 aa17.6■□□□□ 0.41
TRIM65-203ENST00000540812 GPR88Q9GZN0 384 aa17.6■□□□□ 0.41
TRIM65-203ENST00000540812 DLL3Q9NYJ7 618 aa17.6■□□□□ 0.41
TRIM65-203ENST00000540812 SPTBN2O15020 2390 aa17.59■□□□□ 0.41
TRIM65-203ENST00000540812 ANO9A1A5B4 782 aa17.59■□□□□ 0.41
TRIM65-203ENST00000540812 CHRNB1P11230 501 aa17.59■□□□□ 0.41
TRIM65-203ENST00000540812 SOX9P48436 509 aa17.59■□□□□ 0.41
TRIM65-203ENST00000540812 PUM1Q14671 1186 aaKnown RBP eCLIP17.59■□□□□ 0.41
TRIM65-203ENST00000540812 RSPO4Q2I0M5 234 aaPredicted RBP17.59■□□□□ 0.41
TRIM65-203ENST00000540812 USP49Q70CQ1 688 aa17.59■□□□□ 0.41
TRIM65-203ENST00000540812 ARID3BQ8IVW6 561 aaPredicted RBP17.59■□□□□ 0.41
TRIM65-203ENST00000540812 LARP4BQ92615 738 aaKnown RBP17.59■□□□□ 0.41
TRIM65-203ENST00000540812 PSMG2Q969U7 264 aa17.59■□□□□ 0.41
TRIM65-203ENST00000540812 E2F7Q96AV8 911 aa17.59■□□□□ 0.41
TRIM65-203ENST00000540812 LPIN3Q9BQK8 851 aa17.59■□□□□ 0.41
TRIM65-203ENST00000540812 BACH2Q9BYV9 841 aa17.59■□□□□ 0.41
TRIM65-203ENST00000540812 ATXN3LQ9H3M9 355 aa17.59■□□□□ 0.41
TRIM65-203ENST00000540812 SCN1AP35498 2009 aa17.59■□□□□ 0.41
TRIM65-203ENST00000540812 TSC2P49815 1807 aa17.58■□□□□ 0.41
TRIM65-203ENST00000540812 SLC38A8A6NNN8 435 aa17.58■□□□□ 0.4
TRIM65-203ENST00000540812 CHADO15335 359 aa17.58■□□□□ 0.4
TRIM65-203ENST00000540812 BMP15O95972 392 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms