RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 A1CFQ9NQ94 594 aaKnown RBP4.56□□□□□ -1.68
TSG101-205ENST00000540555 RAI14Q9P0K7 980 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 USP18Q9UMW8 372 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 COL4A3Q01955 1670 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 LAMA1P25391 3075 aa4.56□□□□□ -1.68
TSG101-205ENST00000540555 TEP1Q99973 2627 aaKnown RBP4.56□□□□□ -1.68
TSG101-205ENST00000540555 COL12A1Q99715 3063 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 NPHP3-ACAD11A0A0J9YXS1 232 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 BIN1O00499 593 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 CT47B1P0C2W7 299 aaPredicted RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 MSL3P1P0C860 447 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 SRGAP2BP0DMP2 458 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 GLULP15104 373 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 PAMP19021 973 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 GALK1P51570 392 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 MVKQ03426 396 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 MAP4K2Q12851 820 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 NTRK3Q16288 839 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 CSRP2Q16527 193 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 C2orf27AQ580R0 203 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 FAM209AQ5JX71 171 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 ACBD5Q5T8D3 534 aaPredicted RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 NAA16Q6N069 864 aaPredicted RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 TMED8Q6PL24 325 aaPredicted RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 NSMFQ6X4W1 530 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 RASGRP2Q7LDG7 609 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 CPNE8Q86YQ8 564 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 KSR1Q8IVT5 923 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 TDRD5Q8NAT2 981 aaKnown RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 PRPF38AQ8NAV1 312 aaKnown RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 THAP3Q8WTV1 239 aaPredicted RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 POF1BQ8WVV4 589 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 KCTD13Q8WZ19 329 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 SEPT8Q92599 483 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 APBB2Q92870 758 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 KISS1RQ969F8 398 aaPredicted RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 KIRREL1Q96J84 757 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 EXOC2Q96KP1 924 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 BBC3Q96PG8 261 aaPredicted RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 SLF1Q9BQI6 1058 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 WDR11Q9BZH6 1224 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 RNF32Q9H0A6 362 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 ZSCAN32Q9NX65 697 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 ACSL6Q9UKU0 697 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 NPFFR2Q9Y5X5 522 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.55□□□□□ -1.68
TSG101-205ENST00000540555 MYO9AB2RTY4 2548 aa4.55□□□□□ -1.68
TSG101-205ENST00000540555 PIEZO2Q9H5I5 2752 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 RALGAPA2Q2PPJ7 1873 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 RAD50Q92878 1312 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 C7orf72A4D263 438 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 ZNF503-AS2A6NEH8 195 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 RSPH10B2B2RC85 870 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 HAS3O00219 553 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 CAND2O75155 1236 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 DGKIO75912 1065 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 RETP07949 1114 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 MMP3P08254 477 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 RSPH10BP0C881 870 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 RAC2P15153 192 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 JUNBP17275 347 aaPredicted RBP4.54□□□□□ -1.68
TSG101-205ENST00000540555 HOXC8P31273 242 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 L1CAMP32004 1257 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 MTHFRP42898 656 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 TIMM10P62072 90 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 ICA1Q05084 483 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 SQSTM1Q13501 440 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 SLC14A2Q15849 920 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 FAM83BQ5T0W9 1011 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 E4F1Q66K89 784 aaPredicted RBP4.54□□□□□ -1.68
TSG101-205ENST00000540555 LAIR1Q6GTX8 287 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 GALNT18Q6P9A2 607 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 RBM23Q86U06 439 aaKnown RBP4.54□□□□□ -1.68
TSG101-205ENST00000540555 SERINC5Q86VE9 423 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 ZSWIM9Q86XI8 627 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 SCUBE1Q8IWY4 988 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 PPIL6Q8IXY8 311 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 CMTR2Q8IYT2 770 aaKnown RBP4.54□□□□□ -1.68
TSG101-205ENST00000540555 OR6J1Q8NGC5 347 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 FAM126AQ9BYI3 521 aaPredicted RBP4.54□□□□□ -1.68
TSG101-205ENST00000540555 ACAD9Q9H845 621 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 IMPACTQ9P2X3 320 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 SWAP70Q9UH65 585 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 GPR160Q9UJ42 338 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 GMEB2Q9UKD1 530 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 HDAC5Q9UQL6 1122 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 SIT1Q9Y3P8 196 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.54□□□□□ -1.68
TSG101-205ENST00000540555 FANCMQ8IYD8 2048 aa4.54□□□□□ -1.68
TSG101-205ENST00000540555 UBR5O95071 2799 aaPredicted RBP4.53□□□□□ -1.68
TSG101-205ENST00000540555 PTPRCP08575 1304 aa4.53□□□□□ -1.68
TSG101-205ENST00000540555 ATG2AQ2TAZ0 1938 aa4.53□□□□□ -1.68
TSG101-205ENST00000540555 TRBV23OR9-2A0A075B6M9 112 aa4.53□□□□□ -1.68
TSG101-205ENST00000540555 TRBV23-1A0A0A0MS06 115 aa4.53□□□□□ -1.68
TSG101-205ENST00000540555 BLACEA4D250 179 aa4.53□□□□□ -1.68
TSG101-205ENST00000540555 PER2O15055 1255 aa4.53□□□□□ -1.68
TSG101-205ENST00000540555 MEFVO15553 781 aaPredicted RBP4.53□□□□□ -1.68
TSG101-205ENST00000540555 ZBED4O75132 1171 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms