RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 SCP2P22307 547 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 LIG4P49917 911 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 TOB1P50616 345 aaPredicted RBP13.57□□□□□ -0.24
COPS7A-211ENST00000540408 SPAG1Q07617 926 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 FCHO2Q0JRZ9 810 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 MYBPC2Q14324 1141 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 PTPAQ15257 358 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 OVOS1Q6IE37 1185 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 ARID3BQ8IVW6 561 aaPredicted RBP13.57□□□□□ -0.24
COPS7A-211ENST00000540408 SYT2Q8N9I0 419 aaPredicted RBP13.57□□□□□ -0.24
COPS7A-211ENST00000540408 ATXN3LQ9H3M9 355 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 RPF1Q9H9Y2 349 aaKnown RBP13.57□□□□□ -0.24
COPS7A-211ENST00000540408 SEMA4GQ9NTN9 838 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 THG1LQ9NWX6 298 aaKnown RBP13.57□□□□□ -0.24
COPS7A-211ENST00000540408 SLC27A5Q9Y2P5 690 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 KIF3AQ9Y496 699 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.57□□□□□ -0.24
COPS7A-211ENST00000540408 CITO14578 2027 aa13.57□□□□□ -0.24
COPS7A-211ENST00000540408 GPR179Q6PRD1 2367 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.56□□□□□ -0.24
COPS7A-211ENST00000540408 MYBPHLA2RUH7 354 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 CHURC1-FNTBB4DL54 471 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 SPECC1L-ADORA2AF8WAN1 911 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 ARNTLO00327 626 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 SLC30A4O14863 429 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 MEFVO15553 781 aaPredicted RBP13.56□□□□□ -0.24
COPS7A-211ENST00000540408 OR4Q2P0C623 313 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 ODC1P11926 461 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 TYMPP19971 482 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 FNTBP49356 437 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 TUFMP49411 452 aaKnown RBP13.56□□□□□ -0.24
COPS7A-211ENST00000540408 PLCB2Q00722 1185 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 VEPH1Q14D04 833 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 ZBTB6Q15916 424 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 TAF12Q16514 161 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 CSRP2Q16527 193 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 CENPPQ6IPU0 288 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 CEP68Q76N32 757 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 KCNK18Q7Z418 384 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 DNAJB7Q7Z6W7 309 aaPredicted RBP13.56□□□□□ -0.24
COPS7A-211ENST00000540408 TMC8Q8IU68 726 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 CD302Q8IX05 232 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 SYNPOQ8N3V7 929 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 DDX1Q92499 740 aaKnown RBP13.56□□□□□ -0.24
COPS7A-211ENST00000540408 PSMG2Q969U7 264 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 GCNAQ96QF7 691 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 LRRC3Q9BY71 257 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 OBP2AQ9NY56 170 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 HSFX1Q9UBD0 423 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 CEP250Q9BV73 2442 aa13.56□□□□□ -0.24
COPS7A-211ENST00000540408 LACTBL1A8MY62 500 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 HNRNPDLO14979 420 aaKnown RBP13.55□□□□□ -0.24
COPS7A-211ENST00000540408 HRO43593 1189 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 PAPSS2O95340 614 aaPredicted RBP13.55□□□□□ -0.24
COPS7A-211ENST00000540408 PLA2G4BP0C869 781 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 GABRR2P28476 465 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 AARSP49588 968 aaKnown RBP eCLIP13.55□□□□□ -0.24
COPS7A-211ENST00000540408 IL17AQ16552 155 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 RILPL1Q5EBL4 403 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 HYIQ5T013 277 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 GPR158Q5T848 1215 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 HEATR6Q6AI08 1181 aaKnown RBP13.55□□□□□ -0.24
COPS7A-211ENST00000540408 MCTP1Q6DN14 999 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 PRR23CQ6ZRP0 262 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 GPIHBP1Q8IV16 184 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 PLIN2Q99541 437 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 MMTAG2Q9BU76 263 aaKnown RBP13.55□□□□□ -0.24
COPS7A-211ENST00000540408 DNAJC25Q9H1X3 360 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.55□□□□□ -0.24
COPS7A-211ENST00000540408 RBM12Q9NTZ6 932 aaKnown RBP13.55□□□□□ -0.24
COPS7A-211ENST00000540408 ZMYM5Q9UJ78 669 aa13.55□□□□□ -0.24
COPS7A-211ENST00000540408 TICRRQ7Z2Z1 1910 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 F5P12259 2224 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 MTMR11A4FU01 709 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 OGTO15294 1046 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 ADRB1P08588 477 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 CDC25CP30307 473 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 CTHP32929 405 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 ABCD1P33897 745 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 SOX9P48436 509 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 SLC12A3P55017 1021 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 NCKAP1LP55160 1127 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 LILRA4P59901 499 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 GAS6Q14393 721 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 PPM1JQ5JR12 505 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 METTL23Q86XA0 190 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 THEM5Q8N1Q8 247 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 ATAD1Q8NBU5 361 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 TTC8Q8TAM2 541 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 BPIFB1Q8TDL5 484 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 RSPRY1Q96DX4 576 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 CHAMP1Q96JM3 812 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 SENP8Q96LD8 212 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 SEPT5Q99719 369 aaPredicted RBP13.54□□□□□ -0.24
COPS7A-211ENST00000540408 CRISPLD1Q9H336 500 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 TASP1Q9H6P5 420 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 GTSE1Q9NYZ3 720 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 DSEQ9UL01 958 aa13.54□□□□□ -0.24
COPS7A-211ENST00000540408 ODF2LQ9ULJ1 636 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms