RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 FRMPD4Q14CM0 1322 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 ADGRA3Q8IWK6 1321 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 A8MXQ7 604 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CFLARO15519 480 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 ZBED4O75132 1171 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 SYF2O95926 243 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 SERPING1P05155 500 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CYP11B2P19099 503 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CASP1P29466 404 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 KRT81Q14533 505 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 R3HDM1Q15032 1099 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CAPSLQ8WWF8 208 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 VPS50Q96JG6 964 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CDHR1Q96JP9 859 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 PRMT6Q96LA8 375 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 SEMA6BQ9H3T3 888 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 TRIM64CA6NLI5 447 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 PJA2O43164 708 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 GAS7O60861 476 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CDC25AP30304 524 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 HOXC8P31273 242 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 ADCY8P40145 1251 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 OLR1P78380 273 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 DCAF17Q5H9S7 520 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 NXNQ6DKJ4 435 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CALML6Q8TD86 181 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 TMEM206Q9H813 350 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 MRPL44Q9H9J2 332 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 TIMMDC1Q9NPL8 285 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 DBR1Q9UK59 544 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 ADAMTSL1Q8N6G6 1762 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 TRIM49BA6NDI0 452 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 BTNL10A8MVZ5 291 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 KLHL41O60662 606 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 GDF11O95390 407 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 FESP07332 822 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 TNFAIP3P21580 790 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CHRNA5P30532 468 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 SLC12A3P55017 1021 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 COPS2P61201 443 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 ELF3P78545 371 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 KNOP1Q1ED39 458 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 MIIPQ5JXC2 388 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 RSRC2Q7L4I2 434 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 KCNK16Q96T55 309 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 TBC1D7Q9P0N9 293 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 ARMCX3Q9UH62 379 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 SIK3Q9Y2K2 1263 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CAB39Q9Y376 341 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 USP15Q9Y4E8 981 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 RPTORQ8N122 1335 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 KPNA4O00629 521 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-214ENST00000540109 NCK2O43639 380 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 SEC24DO94855 1032 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-214ENST00000540109 OCM2P0CE71 109 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 OCMP0CE72 109 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-214ENST00000540109 NFKBIAP25963 317 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 PPARGP37231 505 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-214ENST00000540109 HSD17B4P51659 736 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 RPL26P61254 145 aaKnown RBP6.36□□□□□ -1.39
PTPRD-214ENST00000540109 SAPCD2Q86UD0 394 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 RHOT2Q8IXI1 618 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 MDM1Q8TC05 714 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 MAGED4Q96JG8 741 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 FMO2Q99518 471 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 EXOC7Q9UPT5 735 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 PFASO15067 1338 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 GOLGA8IPA6NC78 632 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 GOLGA8JA6NMD2 632 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 USP17L15C9J2P7 530 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 USP17L13C9JLJ4 530 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 USP17L11C9JVI0 530 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 USP17L18D6R9N7 530 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 USP17L22D6RA61 530 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 USP17L17D6RBQ6 530 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 USP17L19D6RCP7 530 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 USP17L20D6RJB6 530 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 GOLGA8TH3BQL2 631 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 ASAP2O43150 1006 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 ACSL3O95573 720 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 MARK3P27448 753 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 GARSP41250 739 aaKnown RBP6.36□□□□□ -1.39
PTPRD-214ENST00000540109 BPIFB4P59827 614 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 SPIRE1Q08AE8 756 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 USP17L24Q0WX57 530 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 NFRKBQ6P4R8 1299 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 USP17L6PQ6QN14 398 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 SIAH1Q8IUQ4 282 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 TRIM59Q8IWR1 403 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 MAB21L3Q8N8X9 362 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 RNF169Q8NCN4 708 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 RIN3Q8TB24 985 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 SCG3Q8WXD2 468 aaKnown RBP6.36□□□□□ -1.39
PTPRD-214ENST00000540109 CCSER2Q9H7U1 834 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 NHEJ1Q9H9Q4 299 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-214ENST00000540109 VAV3Q9UKW4 847 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 ORC6Q9Y5N6 252 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 RBBP6Q7Z6E9 1792 aaKnown RBP6.36□□□□□ -1.39
PTPRD-214ENST00000540109 SCN9AQ15858 1988 aa6.36□□□□□ -1.39
PTPRD-214ENST00000540109 SAC3D1A6NKF1 404 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms