RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ADRB2P07550 413 aa16.56■□□□□ 0.24
UBE3B-211ENST00000539843 GDI1P31150 447 aa16.56■□□□□ 0.24
UBE3B-211ENST00000539843 RPS9P46781 194 aaKnown RBP16.56■□□□□ 0.24
UBE3B-211ENST00000539843 TUFMP49411 452 aaKnown RBP16.56■□□□□ 0.24
UBE3B-211ENST00000539843 TAF6P49848 677 aa16.56■□□□□ 0.24
UBE3B-211ENST00000539843 EPHA5P54756 1037 aa16.56■□□□□ 0.24
UBE3B-211ENST00000539843 SMARCB1Q12824 385 aa16.56■□□□□ 0.24
UBE3B-211ENST00000539843 DUSP4Q13115 394 aa16.56■□□□□ 0.24
UBE3B-211ENST00000539843 C9orf57Q5W0N0 161 aa16.56■□□□□ 0.24
UBE3B-211ENST00000539843 CCDC73Q6ZRK6 1079 aa16.56■□□□□ 0.24
UBE3B-211ENST00000539843 HS6ST3Q8IZP7 471 aa16.56■□□□□ 0.24
UBE3B-211ENST00000539843 CSGALNACT1Q8TDX6 532 aa16.56■□□□□ 0.24
UBE3B-211ENST00000539843 MSANTD3Q96H12 275 aa16.56■□□□□ 0.24
UBE3B-211ENST00000539843 R3HCC1Q9Y3T6 440 aaKnown RBP16.56■□□□□ 0.24
UBE3B-211ENST00000539843 FAM189A1O60320 539 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 LRRN2O75325 713 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 NFICP08651 508 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 OR4Q2P0C623 313 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 GLULP15104 373 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 CD72P21854 359 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 TARSP26639 723 aaKnown RBP16.55■□□□□ 0.24
UBE3B-211ENST00000539843 PNPLA4P41247 253 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 ACOT2P49753 483 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 GUCY2FP51841 1108 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 CSTF1Q05048 431 aaKnown RBP16.55■□□□□ 0.24
UBE3B-211ENST00000539843 ALCAMQ13740 583 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 TEAD2Q15562 447 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 SV2CQ496J9 727 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 DYMQ7RTS9 669 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 SFR1Q86XK3 245 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 C2orf15Q8WU43 125 aaKnown RBP16.55■□□□□ 0.24
UBE3B-211ENST00000539843 RUBCNQ92622 972 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 ACCSQ96QU6 501 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 PLA2G2FQ9BZM2 168 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 TRPV4Q9HBA0 871 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 TRPV5Q9NQA5 729 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 PCDHB13Q9Y5F0 798 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 PCDHGA2Q9Y5H1 932 aa16.55■□□□□ 0.24
UBE3B-211ENST00000539843 SRPRBQ9Y5M8 271 aaKnown RBP16.55■□□□□ 0.24
UBE3B-211ENST00000539843 RIF1Q5UIP0 2472 aaKnown RBP16.54■□□□□ 0.24
UBE3B-211ENST00000539843 A0A1W2PRU2 124 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 MTMR11A4FU01 709 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 GCNT3O95395 438 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 LDHAP00338 332 aaKnown RBP16.54■□□□□ 0.24
UBE3B-211ENST00000539843 FCARP24071 287 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 CCR2P41597 374 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 STAT6P42226 847 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 ID4P47928 161 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 GRIN1Q05586 938 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 CUL4AQ13619 759 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 MGAT5BQ3V5L5 792 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 ZC2HC1CQ53FD0 456 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-211ENST00000539843 CENPPQ6IPU0 288 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 STXBP4Q6ZWJ1 553 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 ZNF720Q7Z2F6 126 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 MFSD6LQ8IWD5 586 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 DCP1BQ8IZD4 617 aaKnown RBP16.54■□□□□ 0.24
UBE3B-211ENST00000539843 SYCP3Q8IZU3 236 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 CACTINQ8WUQ7 758 aaKnown RBP16.54■□□□□ 0.24
UBE3B-211ENST00000539843 CLDN23Q96B33 292 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 EPSTI1Q96J88 318 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 SEPT5Q99719 369 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-211ENST00000539843 PYM1Q9BRP8 204 aaKnown RBP16.54■□□□□ 0.24
UBE3B-211ENST00000539843 FAM126AQ9BYI3 521 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-211ENST00000539843 LRRC27Q9C0I9 530 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 ATXN3LQ9H3M9 355 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 ZNF334Q9HCZ1 680 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-211ENST00000539843 DPP3Q9NY33 737 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 ZMYM5Q9UJ78 669 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 NDRG2Q9UN36 371 aaKnown RBP16.54■□□□□ 0.24
UBE3B-211ENST00000539843 CLIC4Q9Y696 253 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 PIAS3Q9Y6X2 628 aa16.54■□□□□ 0.24
UBE3B-211ENST00000539843 FAM186AA6NE01 2351 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 HEPACAM2A8MVW5 462 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 PIRO00625 290 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 CYB561D2O14569 222 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 CYP11A1P05108 521 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 IDEP14735 1019 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 GJA1P17302 382 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 CDC25CP30307 473 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 NRLP54845 237 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 TSPY1Q01534 308 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 CEBPZQ03701 1054 aaKnown RBP16.53■□□□□ 0.24
UBE3B-211ENST00000539843 SLC39A4Q6P5W5 647 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 VITQ6UXI7 678 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 ATAD1Q8NBU5 361 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 SHKBP1Q8TBC3 707 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 FAM3CQ92520 227 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 PSMG2Q969U7 264 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 ZSCAN16Q9H4T2 348 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-211ENST00000539843 ZSCAN32Q9NX65 697 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 NCDNQ9UBB6 729 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 SLC27A5Q9Y2P5 690 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 MTF2Q9Y483 593 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-211ENST00000539843 STYXL1Q9Y6J8 313 aa16.53■□□□□ 0.24
UBE3B-211ENST00000539843 PDCD11Q14690 1871 aaKnown RBP16.52■□□□□ 0.24
UBE3B-211ENST00000539843 ANO9A1A5B4 782 aa16.52■□□□□ 0.24
UBE3B-211ENST00000539843 ANKRD63C9JTQ0 380 aa16.52■□□□□ 0.24
UBE3B-211ENST00000539843 VIPR2P41587 438 aa16.52■□□□□ 0.24
UBE3B-211ENST00000539843 KPNA1P52294 538 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms