RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 GPR62Q9BZJ7 368 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 NIF3L1Q9GZT8 377 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 APOBEC3GQ9HC16 384 aaKnown RBP16.54■□□□□ 0.24
DDB1-216ENST00000539739 DSEQ9UL01 958 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 PCDHB8Q9UN66 801 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 GBF1Q92538 1859 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 A0A1W2PQC6 194 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 I3L4J1 428 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 SYN3O14994 580 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 TBXAS1P24557 533 aaPredicted RBP16.53■□□□□ 0.24
DDB1-216ENST00000539739 BMS1Q14692 1282 aaKnown RBP16.53■□□□□ 0.24
DDB1-216ENST00000539739 USP41Q3LFD5 358 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 FAM171A1Q5VUB5 890 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 METTL23Q86XA0 190 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 PPM1KQ8N3J5 372 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 TOP6BLQ8N6T0 577 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 TATDN2Q93075 761 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 LSM14BQ9BX40 385 aaKnown RBP16.53■□□□□ 0.24
DDB1-216ENST00000539739 LZTS1Q9Y250 596 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 TRIOBPQ9H2D6 2365 aa16.53■□□□□ 0.24
DDB1-216ENST00000539739 SOD2P04179 222 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 FAM163BP0C2L3 166 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 TYMPP19971 482 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 UBE3AQ05086 875 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 KIAA1841Q6NSI8 718 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 CEP57Q86XR8 500 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 TMEM86AQ8N2M4 240 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 NEK11Q8NG66 645 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 ARNTL2Q8WYA1 636 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 ELMO3Q96BJ8 720 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 TTPALQ9BTX7 342 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 CERS4Q9HA82 394 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 CYP3A43Q9HB55 503 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 PLCB1Q9NQ66 1216 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 APEX2Q9UBZ4 518 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 POLIQ9UNA4 740 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 SIK3Q9Y2K2 1263 aa16.52■□□□□ 0.24
DDB1-216ENST00000539739 YWHAEP62258 255 aaKnown RBP16.52■□□□□ 0.23
DDB1-216ENST00000539739 GCNT1Q02742 428 aa16.52■□□□□ 0.23
DDB1-216ENST00000539739 GPM6BQ13491 265 aa16.52■□□□□ 0.23
DDB1-216ENST00000539739 SCARA5Q6ZMJ2 495 aa16.52■□□□□ 0.23
DDB1-216ENST00000539739 ENOSF1Q7L5Y1 443 aa16.52■□□□□ 0.23
DDB1-216ENST00000539739 SPRED2Q7Z698 418 aa16.52■□□□□ 0.23
DDB1-216ENST00000539739 VPS52Q8N1B4 723 aa16.52■□□□□ 0.23
DDB1-216ENST00000539739 SPATA18Q8TC71 538 aa16.52■□□□□ 0.23
DDB1-216ENST00000539739 HERC2P3Q9BVR0 1158 aa16.52■□□□□ 0.23
DDB1-216ENST00000539739 ALG13Q9NP73 1137 aaKnown RBP16.52■□□□□ 0.23
DDB1-216ENST00000539739 UBE2TQ9NPD8 197 aaPredicted RBP16.52■□□□□ 0.23
DDB1-216ENST00000539739 DAAM1Q9Y4D1 1078 aa16.52■□□□□ 0.23
DDB1-216ENST00000539739 LAMA2P24043 3122 aaKnown RBP16.52■□□□□ 0.23
DDB1-216ENST00000539739 TMEM265A0A087WTH1 108 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 H3BNC9 293 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 TACC1O75410 805 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 EFEMP2O95967 443 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 CYP11A1P05108 521 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 FGFR3P22607 806 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 RFX1P22670 979 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 TKTP29401 623 aaKnown RBP16.51■□□□□ 0.23
DDB1-216ENST00000539739 MFAP3P55082 362 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 CUL2Q13617 745 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 SOWAHAQ2M3V2 549 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 KLHDC7AQ5VTJ3 777 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 PHLDB3Q6NSJ2 640 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 PDXDC1Q6P996 788 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 RRAGAQ7L523 313 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 RNF168Q8IYW5 571 aaPredicted RBP16.51■□□□□ 0.23
DDB1-216ENST00000539739 ADGRF2Q8IZF7 708 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 SPPL3Q8TCT6 385 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 BCO2Q9BYV7 579 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 FAM124BQ9H5Z6 455 aaPredicted RBP16.51■□□□□ 0.23
DDB1-216ENST00000539739 ZNF576Q9H609 170 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 GRPEL1Q9HAV7 217 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 FAM207AQ9NSI2 230 aaPredicted RBP16.51■□□□□ 0.23
DDB1-216ENST00000539739 L1RE1Q9UN81 338 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 SSX2IPQ9Y2D8 614 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 TIMM13Q9Y5L4 95 aaPredicted RBP16.51■□□□□ 0.23
DDB1-216ENST00000539739 LAMA3Q16787 3333 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 KIAA1671Q9BY89 1806 aa16.51■□□□□ 0.23
DDB1-216ENST00000539739 URODP06132 367 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 TRIM21P19474 475 aaKnown RBP16.5■□□□□ 0.23
DDB1-216ENST00000539739 ASPAP45381 313 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 LHX1P48742 406 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 KLK7P49862 253 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 YWHAHQ04917 246 aaPredicted RBP16.5■□□□□ 0.23
DDB1-216ENST00000539739 WSCD1Q658N2 575 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 OVOS1Q6IE37 1185 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 TAS1R1Q7RTX1 841 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 TMC7Q7Z402 723 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 LIMS2Q7Z4I7 341 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 ZSCAN30Q86W11 494 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 ARHGEF19Q8IW93 802 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 THEM5Q8N1Q8 247 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 PDCL2Q8N4E4 241 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 TTC39CQ8N584 583 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 POF1BQ8WVV4 589 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 VN1R3Q9BXE9 311 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 SNX25Q9H3E2 840 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 SMYD3Q9H7B4 428 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 SIX2Q9NPC8 291 aa16.5■□□□□ 0.23
DDB1-216ENST00000539739 CHST7Q9NS84 486 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms