RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 PIK3R5Q8WYR1 880 aa13.97□□□□□ -0.17
CCDC42-202ENST00000539522 TATDN2Q93075 761 aa13.97□□□□□ -0.17
CCDC42-202ENST00000539522 TMEM209Q96SK2 561 aa13.97□□□□□ -0.17
CCDC42-202ENST00000539522 CLSTN3Q9BQT9 956 aa13.97□□□□□ -0.17
CCDC42-202ENST00000539522 TUBGCP2Q9BSJ2 902 aa13.97□□□□□ -0.17
CCDC42-202ENST00000539522 LMAN2LQ9H0V9 348 aa13.97□□□□□ -0.17
CCDC42-202ENST00000539522 RXFP1Q9HBX9 757 aa13.97□□□□□ -0.17
CCDC42-202ENST00000539522 TAB2Q9NYJ8 693 aa13.97□□□□□ -0.17
CCDC42-202ENST00000539522 LIMA1Q9UHB6 759 aaKnown RBP13.97□□□□□ -0.17
CCDC42-202ENST00000539522 AJAP1Q9UKB5 411 aaPredicted RBP13.97□□□□□ -0.17
CCDC42-202ENST00000539522 LRRC10BA6NIK2 292 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 C2CD2LO14523 706 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 CYB561D2O14569 222 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 CNPP09543 421 aaKnown RBP13.96□□□□□ -0.17
CCDC42-202ENST00000539522 ASPAP45381 313 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 RAP1GAPP47736 663 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 GLUD2P49448 558 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 PLCB2Q00722 1185 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 KRT17Q04695 432 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 KCNMA1Q12791 1236 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 HYAL1Q12794 435 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 BIRC3Q13489 604 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 TPD52L1Q16890 204 aaPredicted RBP13.96□□□□□ -0.17
CCDC42-202ENST00000539522 USP41Q3LFD5 358 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 WSCD1Q658N2 575 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 SARM1Q6SZW1 724 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 OR10T2Q8NGX3 314 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 ARID3AQ99856 593 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 MRPL45Q9BRJ2 306 aaKnown RBP13.96□□□□□ -0.17
CCDC42-202ENST00000539522 TTPALQ9BTX7 342 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 SMYD3Q9H7B4 428 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 SIX2Q9NPC8 291 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 RAB20Q9NX57 234 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 MTRRQ9UBK8 725 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCDC42-202ENST00000539522 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.96□□□□□ -0.17
CCDC42-202ENST00000539522 SNX9Q9Y5X1 595 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 C5orf42Q9H799 3197 aa13.96□□□□□ -0.17
CCDC42-202ENST00000539522 PTPRDP23468 1912 aa13.96□□□□□ -0.18
CCDC42-202ENST00000539522 MTCL1Q9Y4B5 1905 aaKnown RBP13.96□□□□□ -0.18
CCDC42-202ENST00000539522 CARNS1A5YM72 827 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 GABRDO14764 452 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 SYN3O14994 580 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 PER2O15055 1255 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 TEX28O15482 410 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 OAZ2O95190 189 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 FGFR1OPO95684 399 aaKnown RBP13.95□□□□□ -0.18
CCDC42-202ENST00000539522 CXCL14O95715 111 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 GLP2RO95838 553 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 AFPP02771 609 aaKnown RBP13.95□□□□□ -0.18
CCDC42-202ENST00000539522 CDK11BP21127 795 aaKnown RBP13.95□□□□□ -0.18
CCDC42-202ENST00000539522 EEF1GP26641 437 aaKnown RBP13.95□□□□□ -0.18
CCDC42-202ENST00000539522 PNPLA4P41247 253 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 PIK3CAP42336 1068 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 CDH8P55286 799 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 MYL7Q01449 175 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 COL19A1Q14993 1142 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 MAN2A1Q16706 1144 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 SV2CQ496J9 727 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 VWA3BQ502W6 1294 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 TCEAL5Q5H9L2 206 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 TMC7Q7Z402 723 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 CEP57Q86XR8 500 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 ARHGEF19Q8IW93 802 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 UBR7Q8N806 425 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 FBXL13Q8NEE6 735 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 SLC22A17Q8WUG5 538 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 RIN2Q8WYP3 895 aaPredicted RBP13.95□□□□□ -0.18
CCDC42-202ENST00000539522 KAT5Q92993 513 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 ZNF560Q96MR9 790 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 KLHL5Q96PQ7 755 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 PKMYT1Q99640 499 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 LPIN3Q9BQK8 851 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 BCO2Q9BYV7 579 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 LMCD1Q9NZU5 365 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 HMGXB4Q9UGU5 601 aa13.95□□□□□ -0.18
CCDC42-202ENST00000539522 LINC01565O15544 149 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 AP5Z1O43299 807 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 CLASP2O75122 1294 aaKnown RBP13.94□□□□□ -0.18
CCDC42-202ENST00000539522 PHACTR2O75167 634 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 ADCY5O95622 1261 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 OR4Q2P0C623 313 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 SLC9A1P19634 815 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 TYMPP19971 482 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 LMO2P25791 158 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 ATICP31939 592 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 MTIF2P46199 727 aaKnown RBP13.94□□□□□ -0.18
CCDC42-202ENST00000539522 KLK7P49862 253 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 COPB1P53618 953 aaKnown RBP13.94□□□□□ -0.18
CCDC42-202ENST00000539522 NOP14P78316 857 aaKnown RBP13.94□□□□□ -0.18
CCDC42-202ENST00000539522 CCDC173Q0VFZ6 552 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
CCDC42-202ENST00000539522 PTPN21Q16825 1174 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 DUSP6Q16828 381 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 SGSM1Q2NKQ1 1148 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 ZNF699Q32M78 642 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 WDR72Q3MJ13 1102 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 PHLDB3Q6NSJ2 640 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 LILRA6Q6PI73 481 aa13.94□□□□□ -0.18
CCDC42-202ENST00000539522 DSTYKQ6XUX3 929 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms