RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 MYLK2Q9H1R3 596 aa13.33□□□□□ -0.28
SFSWAP-208ENST00000539506 CYP39A1Q9NYL5 469 aa13.33□□□□□ -0.28
SFSWAP-208ENST00000539506 ADAMTS5Q9UNA0 930 aa13.33□□□□□ -0.28
SFSWAP-208ENST00000539506 USTQ9Y2C2 406 aa13.33□□□□□ -0.28
SFSWAP-208ENST00000539506 UMODL1Q5DID0 1318 aa13.33□□□□□ -0.28
SFSWAP-208ENST00000539506 NFKBIEO00221 500 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 ENTPD5O75356 428 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 DGAT1O75907 488 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 RARGP13631 454 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 ATP2A2P16615 1042 aaKnown RBP13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 GARTP22102 1010 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 MAPK4P31152 587 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 PSMC4P43686 418 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 RAD23BP54727 409 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 BNIP1Q12981 228 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 SEZ6Q53EL9 994 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 TNFAIP8L3Q5GJ75 292 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 FAM43BQ6ZT52 329 aaPredicted RBP13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 LONP2Q86WA8 852 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 MICALL2Q8IY33 904 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 SPDYE1Q8NFV5 336 aaPredicted RBP13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 ASAP3Q8TDY4 903 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 DDX27Q96GQ7 796 aaKnown RBP13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 C17orf75Q9HAS0 396 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 SLC5A4Q9NY91 659 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 KLHL14Q9P2G3 628 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 SLC9A2Q9UBY0 812 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 NAALADL1Q9UQQ1 740 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 TTLL13PA6NNM8 815 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 BANF1O75531 89 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 PCK1P35558 622 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 LACTBP83111 547 aaPredicted RBP13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 ATP11AP98196 1134 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 ZACNQ401N2 412 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 KAZNQ674X7 775 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 PASD1Q8IV76 773 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 MAGEC3Q8TD91 643 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 ATP6V0A1Q93050 837 aa13.32□□□□□ -0.28
SFSWAP-208ENST00000539506 GOLGA8SH3BPF8 625 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 GOLGA8MH3BSY2 632 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 HLA-DRAP01903 254 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 CYP1A1P04798 512 aaPredicted RBP13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 PSAPP07602 524 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 ZSCAN5DPP0CG00 497 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 GM2AP17900 193 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 EPHB2P29323 1055 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 RHBDF2Q6PJF5 856 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 NSUN6Q8TEA1 469 aaKnown RBP13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 HAUS1Q96CS2 278 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 KLF6Q99612 283 aaPredicted RBP13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 PIDD1Q9HB75 910 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 CNOT7Q9UIV1 285 aaKnown RBP13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 MTUS1Q9ULD2 1270 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 ARL2BPQ9Y2Y0 163 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 PASKQ96RG2 1323 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 EXTL3O43909 919 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 AP1G2O75843 785 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 GMPSP49915 693 aaPredicted RBP13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 OVGP1Q12889 678 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 TNFAIP1Q13829 316 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 MON1BQ7L1V2 547 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 DEFB132Q7Z7B7 95 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 ZNF280CQ8ND82 737 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 OSBPL1AQ9BXW6 950 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 DCTN4Q9UJW0 460 aa13.31□□□□□ -0.28
SFSWAP-208ENST00000539506 CFAP73A6NFT4 308 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 SPDYE5A6NIY4 337 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 SPATA31C2B4DYI2 1134 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 RASA4BC9J798 803 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 RASA4O43374 803 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 TNNI1P19237 187 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 RTP1P59025 263 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 TAS2R40P59535 323 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 PSMD6Q15008 389 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 XRRA1Q6P2D8 792 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 SCYL3Q8IZE3 742 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 P3H4Q92791 437 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 ACSF2Q96CM8 615 aaPredicted RBP13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 WRNIP1Q96S55 665 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 TAOK3Q9H2K8 898 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 C10orf88Q9H8K7 445 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 PI4K2BG5E9Z4 385 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 GOLGA8RI6L899 631 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 MAFGO15525 162 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 GSTA1P08263 222 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 ETS1P14921 441 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 GLRA2P23416 452 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 LIG4P49917 911 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 EMC2Q15006 297 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 SYCP2LQ5T4T6 812 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 MCPH1Q8NEM0 835 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 OR5B17Q8NGF7 314 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 JDP2Q8WYK2 163 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 SLCO2A1Q92959 643 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 C1orf112Q9NSG2 853 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 PCDHB2Q9Y5E7 798 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 STYXL1Q9Y6J8 313 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 TCF4P15884 667 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 CENPCQ03188 943 aa13.3□□□□□ -0.28
SFSWAP-208ENST00000539506 SLMAPQ14BN4 828 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms