RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TNMDQ9H2S6 317 aa24.02■■□□□ 1.44
SCARB1-206ENST00000539320 DPP3Q9NY33 737 aa24.02■■□□□ 1.44
SCARB1-206ENST00000539320 MTMR11A4FU01 709 aa24.01■■□□□ 1.43
SCARB1-206ENST00000539320 CYP11A1P05108 521 aa24.01■■□□□ 1.43
SCARB1-206ENST00000539320 GARTP22102 1010 aa24.01■■□□□ 1.43
SCARB1-206ENST00000539320 EPHA5P54756 1037 aa24.01■■□□□ 1.43
SCARB1-206ENST00000539320 MLF2Q15773 248 aaPredicted RBP24.01■■□□□ 1.43
SCARB1-206ENST00000539320 FOXD4L5Q5VV16 416 aaPredicted RBP24.01■■□□□ 1.43
SCARB1-206ENST00000539320 FOXD4L4Q8WXT5 416 aaPredicted RBP24.01■■□□□ 1.43
SCARB1-206ENST00000539320 SAAL1Q96ER3 474 aa24.01■■□□□ 1.43
SCARB1-206ENST00000539320 FAM213AQ9BRX8 229 aa24.01■■□□□ 1.43
SCARB1-206ENST00000539320 CRISPLD1Q9H336 500 aa24.01■■□□□ 1.43
SCARB1-206ENST00000539320 TFIP11Q9UBB9 837 aaKnown RBP24.01■■□□□ 1.43
SCARB1-206ENST00000539320 DSEQ9UL01 958 aa24.01■■□□□ 1.43
SCARB1-206ENST00000539320 RIF1Q5UIP0 2472 aaKnown RBP24.01■■□□□ 1.43
SCARB1-206ENST00000539320 GFRA3O60609 400 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 HSP90AA1P07900 732 aaKnown RBP24■■□□□ 1.43
SCARB1-206ENST00000539320 MYL4P12829 197 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 FCARP24071 287 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 NBL1P41271 181 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 STARD6P59095 220 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 DUSP4Q13115 394 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 ANGPT1Q15389 498 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 E2F4Q16254 413 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 ARMCX5Q6P1M9 558 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 OR10T2Q8NGX3 314 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 ELSPBP1Q96BH3 223 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 ZNF560Q96MR9 790 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 TMEM209Q96SK2 561 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 PYM1Q9BRP8 204 aaKnown RBP24■■□□□ 1.43
SCARB1-206ENST00000539320 FOXQ1Q9C009 403 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 LRRC27Q9C0I9 530 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 CUEDC2Q9H467 287 aa24■■□□□ 1.43
SCARB1-206ENST00000539320 ZFHX2Q9C0A1 2572 aaPredicted RBP24■■□□□ 1.43
SCARB1-206ENST00000539320 PTPRZ1P23471 2315 aaPredicted RBP24■■□□□ 1.43
SCARB1-206ENST00000539320 FAM186AA6NE01 2351 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 PROB1E7EW31 1015 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 NRG2O14511 850 aaPredicted RBP23.99■■□□□ 1.43
SCARB1-206ENST00000539320 CUTAO60888 179 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 MOSPD3O75425 235 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 LDHAP00338 332 aaKnown RBP23.99■■□□□ 1.43
SCARB1-206ENST00000539320 PDIA4P13667 645 aaKnown RBP23.99■■□□□ 1.43
SCARB1-206ENST00000539320 PRKCQQ04759 706 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 SNW1Q13573 536 aaKnown RBP23.99■■□□□ 1.43
SCARB1-206ENST00000539320 TANGO2Q6ICL3 276 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 CENPPQ6IPU0 288 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 METTL23Q86XA0 190 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 ATAD1Q8NBU5 361 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 ZSWIM2Q8NEG5 633 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 PJA1Q8NG27 643 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 ASB16Q96NS5 453 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 CBWD1Q9BRT8 395 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 DNAJC25Q9H1X3 360 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 TMEM206Q9H813 350 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 RBAKQ9NYW8 714 aaPredicted RBP23.99■■□□□ 1.43
SCARB1-206ENST00000539320 SIT1Q9Y3P8 196 aa23.99■■□□□ 1.43
SCARB1-206ENST00000539320 TCHHQ07283 1943 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 F5P12259 2224 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 CYB561D2O14569 222 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 PRPF6O94906 941 aaKnown RBP23.98■■□□□ 1.43
SCARB1-206ENST00000539320 DCNP07585 359 aaKnown RBP23.98■■□□□ 1.43
SCARB1-206ENST00000539320 ZSCAN22P10073 491 aaPredicted RBP23.98■■□□□ 1.43
SCARB1-206ENST00000539320 ALDH1A3P47895 512 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 EPHB3P54753 998 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 WNT7BP56706 349 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 TFAMQ00059 246 aaKnown RBP23.98■■□□□ 1.43
SCARB1-206ENST00000539320 SV2CQ496J9 727 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 SLC44A4Q53GD3 710 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 FAM78AQ5JUQ0 283 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 STXBP4Q6ZWJ1 553 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 DHX58Q96C10 678 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 PLA2G2FQ9BZM2 168 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 TRIM9Q9C026 710 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 ZFP14Q9HCL3 533 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 KBTBD4Q9NVX7 518 aa23.98■■□□□ 1.43
SCARB1-206ENST00000539320 EXTL3O43909 919 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 F13A1P00488 732 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 GJA1P17302 382 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 COL4A3Q01955 1670 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 MIA3Q5JRA6 1907 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 SHC4Q6S5L8 630 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 TMC8Q8IU68 726 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 TTC9BQ8N6N2 239 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 SHKBP1Q8TBC3 707 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 SMARCD2Q92925 531 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 DDX23Q9BUQ8 820 aaKnown RBP23.97■■□□□ 1.43
SCARB1-206ENST00000539320 ZCWPW1Q9H0M4 648 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 DLGAP2Q9P1A6 1054 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 SLC27A5Q9Y2P5 690 aa23.97■■□□□ 1.43
SCARB1-206ENST00000539320 KANSL1LA0AUZ9 987 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 GOLGA8IPA6NC78 632 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 GOLGA8JA6NMD2 632 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 TULP1O00294 542 aaPredicted RBP23.96■■□□□ 1.43
SCARB1-206ENST00000539320 POLR2BP30876 1174 aaKnown RBP23.96■■□□□ 1.43
SCARB1-206ENST00000539320 PNPLA4P41247 253 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 ASIC1P78348 528 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 TEAD2Q15562 447 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 FOXD4L6Q3SYB3 417 aaPredicted RBP23.96■■□□□ 1.43
SCARB1-206ENST00000539320 SLC39A12Q504Y0 691 aa23.96■■□□□ 1.43
SCARB1-206ENST00000539320 WSCD1Q658N2 575 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms