RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 MS4A14Q96JA4 679 aa27.18■■□□□ 1.94
KLHL42-202ENST00000539176 THAP2Q9H0W7 228 aa27.18■■□□□ 1.94
KLHL42-202ENST00000539176 RNF39Q9H2S5 420 aa27.18■■□□□ 1.94
KLHL42-202ENST00000539176 TAS2R14Q9NYV8 317 aa27.18■■□□□ 1.94
KLHL42-202ENST00000539176 STIM2Q9P246 746 aa27.18■■□□□ 1.94
KLHL42-202ENST00000539176 RALGAPA2Q2PPJ7 1873 aa27.18■■□□□ 1.94
KLHL42-202ENST00000539176 GPC5P78333 572 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 C11orf63Q6NUN7 778 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 VIPAS39Q9H9C1 493 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 EHD2Q9NZN4 543 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 BUB1BO60566 1050 aaPredicted RBP27.17■■□□□ 1.94
KLHL42-202ENST00000539176 RECQL4O94761 1208 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 FTLP02792 175 aaPredicted RBP27.17■■□□□ 1.94
KLHL42-202ENST00000539176 CKBP12277 381 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 CHRNB2P17787 502 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 LPIN1Q14693 890 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 SMYD5Q6GMV2 418 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 CCNI2Q6ZMN8 369 aaPredicted RBP27.17■■□□□ 1.94
KLHL42-202ENST00000539176 LRRC1Q9BTT6 524 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 ASB7Q9H672 318 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 SMARCAL1Q9NZC9 954 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 KLK14Q9P0G3 267 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 TMEM59LQ9UK28 342 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 NUB1Q9Y5A7 615 aa27.17■■□□□ 1.94
KLHL42-202ENST00000539176 PGRMC1O00264 195 aaKnown RBP27.16■■□□□ 1.94
KLHL42-202ENST00000539176 MTA2O94776 668 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 RPLP2P05387 115 aaKnown RBP27.16■■□□□ 1.94
KLHL42-202ENST00000539176 DNA2P51530 1060 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 BPIFB4P59827 614 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 CASP8Q14790 479 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 TMEM132DQ14C87 1099 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 SLC47A2Q86VL8 602 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 ZNF677Q86XU0 584 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 C1orf127Q8N9H9 656 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 SMG8Q8ND04 991 aaKnown RBP27.16■■□□□ 1.94
KLHL42-202ENST00000539176 SNX27Q96L92 541 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 ERVK-5Q9HDB9 667 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 OSGEPQ9NPF4 335 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 SIX4Q9UIU6 781 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 IPPQ9Y573 584 aa27.16■■□□□ 1.94
KLHL42-202ENST00000539176 NOP14P78316 857 aaKnown RBP27.15■■□□□ 1.94
KLHL42-202ENST00000539176 FMO1Q01740 532 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 SMC1AQ14683 1233 aaKnown RBP27.15■■□□□ 1.94
KLHL42-202ENST00000539176 CLUL1Q15846 466 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 FAM26DQ5JW98 314 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 RASGEF1CQ8N431 466 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 ARHGEF26Q96DR7 871 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 KIF12Q96FN5 646 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 ZMAT2Q96NC0 199 aaKnown RBP27.15■■□□□ 1.94
KLHL42-202ENST00000539176 TTC7AQ9ULT0 858 aaPredicted RBP27.15■■□□□ 1.94
KLHL42-202ENST00000539176 PADI3Q9ULW8 664 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 KRT19P08727 400 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 CDK7P50613 346 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 POU5F1Q01860 360 aaKnown RBP27.15■■□□□ 1.94
KLHL42-202ENST00000539176 TRPC3Q13507 836 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 GLRA4Q5JXX5 417 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.15■■□□□ 1.94
KLHL42-202ENST00000539176 PARP2Q9UGN5 583 aa27.15■■□□□ 1.94
KLHL42-202ENST00000539176 YARSP54577 528 aaKnown RBP27.14■■□□□ 1.94
KLHL42-202ENST00000539176 FAM193AP78312 1265 aa27.14■■□□□ 1.94
KLHL42-202ENST00000539176 FBXO46Q6PJ61 603 aaPredicted RBP27.14■■□□□ 1.94
KLHL42-202ENST00000539176 TRAF7Q6Q0C0 670 aa27.14■■□□□ 1.94
KLHL42-202ENST00000539176 ZNF333Q96JL9 665 aa27.14■■□□□ 1.94
KLHL42-202ENST00000539176 GOLPH3Q9H4A6 298 aa27.14■■□□□ 1.94
KLHL42-202ENST00000539176 GPR182O15218 404 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 MGEA5O60502 916 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 ASS1P00966 412 aaKnown RBP27.13■■□□□ 1.93
KLHL42-202ENST00000539176 ITGB3P05106 788 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 ATN1P54259 1190 aaPredicted RBP27.13■■□□□ 1.93
KLHL42-202ENST00000539176 PAK2Q13177 524 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 PCDHB18PQ96TA0 734 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 ACP6Q9NPH0 428 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 CTTNBP2NLQ9P2B4 639 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 MIF4GDA9UHW6 222 aaKnown RBP27.13■■□□□ 1.93
KLHL42-202ENST00000539176 CCDC188H7C350 402 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 CEP104O60308 925 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 CALCAP01258 141 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 TBXAS1P24557 533 aaPredicted RBP27.13■■□□□ 1.93
KLHL42-202ENST00000539176 FAM126BQ8IXS8 530 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 DDX1Q92499 740 aaKnown RBP27.13■■□□□ 1.93
KLHL42-202ENST00000539176 CARD9Q9H257 536 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 GTF3C4Q9UKN8 822 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 PCDHB2Q9Y5E7 798 aa27.13■■□□□ 1.93
KLHL42-202ENST00000539176 PDCD11Q14690 1871 aaKnown RBP27.12■■□□□ 1.93
KLHL42-202ENST00000539176 MEIS3P2A8K0S8 358 aa27.12■■□□□ 1.93
KLHL42-202ENST00000539176 MMEP08473 750 aa27.12■■□□□ 1.93
KLHL42-202ENST00000539176 KRT5P13647 590 aa27.12■■□□□ 1.93
KLHL42-202ENST00000539176 IBSPP21815 317 aaPredicted RBP27.12■■□□□ 1.93
KLHL42-202ENST00000539176 MNX1P50219 401 aaPredicted RBP27.12■■□□□ 1.93
KLHL42-202ENST00000539176 MBTPS1Q14703 1052 aa27.12■■□□□ 1.93
KLHL42-202ENST00000539176 TAF3Q5VWG9 929 aa27.12■■□□□ 1.93
KLHL42-202ENST00000539176 CXorf38Q8TB03 319 aa27.12■■□□□ 1.93
KLHL42-202ENST00000539176 XYLT2Q9H1B5 865 aa27.12■■□□□ 1.93
KLHL42-202ENST00000539176 DMGDHQ9UI17 866 aaKnown RBP27.12■■□□□ 1.93
KLHL42-202ENST00000539176 FAM170AA1A519 330 aa27.11■■□□□ 1.93
KLHL42-202ENST00000539176 CUL2Q13617 745 aa27.11■■□□□ 1.93
KLHL42-202ENST00000539176 ALKAL1Q6UXT8 129 aa27.11■■□□□ 1.93
KLHL42-202ENST00000539176 AENQ8WTP8 325 aaKnown RBP27.11■■□□□ 1.93
KLHL42-202ENST00000539176 C18orf25Q96B23 403 aaPredicted RBP27.11■■□□□ 1.93
KLHL42-202ENST00000539176 NAP1L3Q99457 506 aaPredicted RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms