RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 PPM1AP35813 382 aa25.18■■□□□ 1.62
TMEM260-202ENST00000538838 GCNT1Q02742 428 aa25.18■■□□□ 1.62
TMEM260-202ENST00000538838 SOWAHAQ2M3V2 549 aa25.18■■□□□ 1.62
TMEM260-202ENST00000538838 TMEM169Q96HH4 297 aa25.18■■□□□ 1.62
TMEM260-202ENST00000538838 TTYH3Q9C0H2 523 aa25.18■■□□□ 1.62
TMEM260-202ENST00000538838 NLRC4Q9NPP4 1024 aa25.18■■□□□ 1.62
TMEM260-202ENST00000538838 CHD7Q9P2D1 2997 aa25.18■■□□□ 1.62
TMEM260-202ENST00000538838 HUS1O60921 280 aa25.17■■□□□ 1.62
TMEM260-202ENST00000538838 WEE2P0C1S8 567 aa25.17■■□□□ 1.62
TMEM260-202ENST00000538838 PAX3P23760 479 aa25.17■■□□□ 1.62
TMEM260-202ENST00000538838 TBXAS1P24557 533 aaPredicted RBP25.17■■□□□ 1.62
TMEM260-202ENST00000538838 CDH8P55286 799 aa25.17■■□□□ 1.62
TMEM260-202ENST00000538838 TAP1Q03518 808 aa25.17■■□□□ 1.62
TMEM260-202ENST00000538838 RAPGEF1Q13905 1077 aa25.17■■□□□ 1.62
TMEM260-202ENST00000538838 ARHGAP44Q17R89 818 aa25.17■■□□□ 1.62
TMEM260-202ENST00000538838 NAA15Q9BXJ9 866 aaKnown RBP25.17■■□□□ 1.62
TMEM260-202ENST00000538838 COLQQ9Y215 455 aaPredicted RBP25.17■■□□□ 1.62
TMEM260-202ENST00000538838 TIMM13Q9Y5L4 95 aaPredicted RBP25.17■■□□□ 1.62
TMEM260-202ENST00000538838 TRAPPC3O43617 180 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 ODC1P11926 461 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 CD58P19256 250 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 TKTP29401 623 aaKnown RBP25.16■■□□□ 1.62
TMEM260-202ENST00000538838 CDC25BP30305 580 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 BMPR1AP36894 532 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 PDCL2Q8N4E4 241 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 TOP6BLQ8N6T0 577 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 KLHL23Q8NBE8 558 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 APPL2Q8NEU8 664 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 MRPL45Q9BRJ2 306 aaKnown RBP25.16■■□□□ 1.62
TMEM260-202ENST00000538838 CEP72Q9P209 647 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 PCDHB8Q9UN66 801 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 RWDD3Q9Y3V2 267 aa25.16■■□□□ 1.62
TMEM260-202ENST00000538838 FGF18O76093 207 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 EFEMP2O95967 443 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 GYPCP04921 128 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 RFX1P22670 979 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 DNAJB2P25686 324 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 MFAP3P55082 362 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 FAM171A1Q5VUB5 890 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 WSCD1Q658N2 575 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 TAS1R1Q7RTX1 841 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 LIMS2Q7Z4I7 341 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 ADGRF2Q8IZF7 708 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 KBTBD7Q8WVZ9 684 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 FAXDC2Q96IV6 333 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 B3GALT6Q96L58 329 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 FBXL5Q9UKA1 691 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 COL4A4P53420 1690 aaPredicted RBP25.15■■□□□ 1.62
TMEM260-202ENST00000538838 ELAVL2Q12926 359 aaKnown RBP25.15■■□□□ 1.62
TMEM260-202ENST00000538838 FIGNQ5HY92 759 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 PPP2R2DQ66LE6 453 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 CACNA2D4Q7Z3S7 1137 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 RNF168Q8IYW5 571 aaPredicted RBP25.15■■□□□ 1.62
TMEM260-202ENST00000538838 TGS1Q96RS0 853 aaKnown RBP25.15■■□□□ 1.62
TMEM260-202ENST00000538838 NUP58Q9BVL2 599 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 CYP3A43Q9HB55 503 aa25.15■■□□□ 1.62
TMEM260-202ENST00000538838 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.15■■□□□ 1.62
TMEM260-202ENST00000538838 RNF225M0QZC1 329 aaPredicted RBP25.14■■□□□ 1.61
TMEM260-202ENST00000538838 PNMA6AP0CW24 399 aaPredicted RBP25.14■■□□□ 1.61
TMEM260-202ENST00000538838 SMAD3P84022 425 aaKnown RBP25.14■■□□□ 1.61
TMEM260-202ENST00000538838 ENOSF1Q7L5Y1 443 aa25.14■■□□□ 1.61
TMEM260-202ENST00000538838 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.14■■□□□ 1.61
TMEM260-202ENST00000538838 CEP57Q86XR8 500 aa25.14■■□□□ 1.61
TMEM260-202ENST00000538838 DRC7Q8IY82 874 aa25.14■■□□□ 1.61
TMEM260-202ENST00000538838 UBR7Q8N806 425 aa25.14■■□□□ 1.61
TMEM260-202ENST00000538838 CPLX3Q8WVH0 158 aa25.14■■□□□ 1.61
TMEM260-202ENST00000538838 GPR88Q9GZN0 384 aa25.14■■□□□ 1.61
TMEM260-202ENST00000538838 CISHQ9NSE2 258 aa25.14■■□□□ 1.61
TMEM260-202ENST00000538838 CYP11A1P05108 521 aa25.13■■□□□ 1.61
TMEM260-202ENST00000538838 ACO1P21399 889 aaKnown RBP25.13■■□□□ 1.61
TMEM260-202ENST00000538838 ERVK-21P61565 698 aa25.13■■□□□ 1.61
TMEM260-202ENST00000538838 DRAP1Q14919 205 aaPredicted RBP25.13■■□□□ 1.61
TMEM260-202ENST00000538838 DPH6Q7L8W6 267 aa25.13■■□□□ 1.61
TMEM260-202ENST00000538838 OSTM1Q86WC4 334 aa25.13■■□□□ 1.61
TMEM260-202ENST00000538838 SPC24Q8NBT2 197 aa25.13■■□□□ 1.61
TMEM260-202ENST00000538838 FAM81BQ96LP2 452 aa25.13■■□□□ 1.61
TMEM260-202ENST00000538838 PLVAPQ9BX97 442 aa25.13■■□□□ 1.61
TMEM260-202ENST00000538838 HMGXB4Q9UGU5 601 aa25.13■■□□□ 1.61
TMEM260-202ENST00000538838 DAAM1Q9Y4D1 1078 aa25.13■■□□□ 1.61
TMEM260-202ENST00000538838 A0A1W2PPC1 479 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 ARHGEF37A1IGU5 675 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 C5orf67F2Z3F1 127 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 SYN3O14994 580 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 HCRTO43612 131 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 TACC1O75410 805 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 FGFR3P22607 806 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 FXR1P51114 621 aaKnown RBP eCLIP25.12■■□□□ 1.61
TMEM260-202ENST00000538838 JAM2P57087 298 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 PLCB3Q01970 1234 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 TRIM14Q14142 442 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 RTP2Q5QGT7 225 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 PRPF38BQ5VTL8 546 aaKnown RBP25.12■■□□□ 1.61
TMEM260-202ENST00000538838 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.12■■□□□ 1.61
TMEM260-202ENST00000538838 DDX53Q86TM3 631 aaKnown RBP25.12■■□□□ 1.61
TMEM260-202ENST00000538838 SHC3Q92529 594 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 BAP1Q92560 729 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 SAMD11Q96NU1 681 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 HERC2P3Q9BVR0 1158 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 STK33Q9BYT3 514 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 CERS4Q9HA82 394 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms