RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 RFC4P35249 363 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 ADCY1Q08828 1119 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 TNIP1Q15025 636 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 RASA2Q15283 850 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 MAPRE1Q15691 268 aaKnown RBP9.53□□□□□ -0.88
SNHG1-209ENST00000538654 SLC15A2Q16348 729 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 CTC1Q2NKJ3 1217 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 CNPY1Q3B7I2 92 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 ACSBG2Q5FVE4 666 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 TBC1D9BQ66K14 1250 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 CCDC62Q6P9F0 684 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 RFWD3Q6PCD5 774 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 OTOAQ7RTW8 1153 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 TRIM74Q86UV6 250 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 TRIM73Q86UV7 250 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 C1orf54Q8WWF1 131 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 HAPLN3Q96S86 360 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 SRPK1Q96SB4 655 aaKnown RBP9.53□□□□□ -0.88
SNHG1-209ENST00000538654 POP1Q99575 1024 aaKnown RBP9.53□□□□□ -0.88
SNHG1-209ENST00000538654 MIPEPQ99797 713 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 ASCC2Q9H1I8 757 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-209ENST00000538654 DNAJB4Q9UDY4 337 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 RABGAP1Q9Y3P9 1069 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 FRMPD2Q68DX3 1309 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-209ENST00000538654 A0A1B0GVG6 124 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 FAM196BA6NMK8 535 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 F8W8V4 182 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 CLDN3O15551 220 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 TBX10O75333 385 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 SPAG7O75391 227 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 MAGEA4P43358 317 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 MCL1Q07820 350 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 MAP7Q14244 749 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 KRT72Q14CN4 511 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 GRAMD1BQ3KR37 738 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 PABPC1LQ4VXU2 614 aaKnown RBP9.53□□□□□ -0.88
SNHG1-209ENST00000538654 C6orf163Q5TEZ5 329 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 IL31Q6EBC2 164 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 DPY19L2Q6NUT2 758 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 DSTYKQ6XUX3 929 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 ST13P4Q8IZP2 240 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-209ENST00000538654 FBXO22Q8NEZ5 403 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 SLC20A1Q8WUM9 679 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 PSPC1Q8WXF1 523 aaKnown RBP9.53□□□□□ -0.88
SNHG1-209ENST00000538654 ZNF75CPQ92670 426 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-209ENST00000538654 TIFAQ96CG3 184 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 PTCD3Q96EY7 689 aaKnown RBP9.53□□□□□ -0.88
SNHG1-209ENST00000538654 MBOAT7Q96N66 472 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 NUP85Q9BW27 656 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 GTF3C4Q9UKN8 822 aa9.53□□□□□ -0.88
SNHG1-209ENST00000538654 DDX60LQ5H9U9 1706 aaKnown RBP9.53□□□□□ -0.88
SNHG1-209ENST00000538654 NDC80O14777 642 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 P4HA2O15460 535 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 TOM1O60784 492 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 LILRB3O75022 631 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 LRRN2O75325 713 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 CHRNB2P17787 502 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 CLK1P49759 484 aaKnown RBP9.52□□□□□ -0.88
SNHG1-209ENST00000538654 CDK7P50613 346 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 NEK3P51956 506 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 DSG1Q02413 1049 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 MFSD10Q14728 455 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 SEPT7Q16181 437 aaKnown RBP9.52□□□□□ -0.88
SNHG1-209ENST00000538654 CBWD6Q4V339 395 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 LIN52Q52LA3 116 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 CBWD3Q5JTY5 395 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 CBWD5Q5RIA9 395 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 ZNF804AQ7Z570 1209 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 PHLDB2Q86SQ0 1253 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 CCNJLQ8IV13 435 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 ZCCHC9Q8N567 271 aaKnown RBP9.52□□□□□ -0.88
SNHG1-209ENST00000538654 SMAD5Q99717 465 aaKnown RBP9.52□□□□□ -0.88
SNHG1-209ENST00000538654 TRIM55Q9BYV6 548 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 DCLK3Q9C098 648 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 UBE2OQ9C0C9 1292 aaKnown RBP9.52□□□□□ -0.88
SNHG1-209ENST00000538654 NPHS2Q9NP85 383 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 DNAJC17Q9NVM6 304 aaKnown RBP9.52□□□□□ -0.88
SNHG1-209ENST00000538654 SAP30BPQ9UHR5 308 aaKnown RBP9.52□□□□□ -0.88
SNHG1-209ENST00000538654 MTO1Q9Y2Z2 717 aaKnown RBP9.52□□□□□ -0.88
SNHG1-209ENST00000538654 GMEB1Q9Y692 573 aa9.52□□□□□ -0.88
SNHG1-209ENST00000538654 TSPAN6O43657 245 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 FAM13AO94988 1023 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 SNHG28P0DPA3 235 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 CETN2P41208 172 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 MAGEA8P43361 318 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 LSAMPQ13449 338 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 ANKS1BQ7Z6G8 1248 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 MAPKAPK5Q8IW41 473 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 SCYL3Q8IZE3 742 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 PDCD7Q8N8D1 485 aaKnown RBP9.52□□□□□ -0.89
SNHG1-209ENST00000538654 OSBPL8Q9BZF1 889 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 KIAA1586Q9HCI6 787 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 UBE2TQ9NPD8 197 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-209ENST00000538654 TFCP2L1Q9NZI6 479 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 NDUFA13Q9P0J0 144 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 SEL1LQ9UBV2 794 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 SLC24A2Q9UI40 661 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 TMCC3Q9ULS5 477 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 PLIN4Q96Q06 1357 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 ZBED4O75132 1171 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms