RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 KPNA1P52294 538 aaPredicted RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 CDR2Q01850 454 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 ZNF177Q13360 481 aaPredicted RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 MUM1Q2TAK8 710 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 FASTKD1Q53R41 847 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 EFHC1Q5JVL4 640 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 IZUMO3Q5VZ72 239 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 BCAS4Q8TDM0 211 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 WHAMMQ8TF30 809 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 DDX47Q9H0S4 455 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 WDCPQ9H6R7 721 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 AGPAT3Q9NRZ7 376 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 WDR35Q9P2L0 1181 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 FBXL21Q9UKT6 434 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 M0QYT0 321 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 TLR2O60603 784 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 C1orf131Q8NDD1 294 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 SRPK1Q96SB4 655 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.63□□□□□ -1.519e-7■□□□□ 10.7
LRP6-203ENST00000538239 ITIH6Q6UXX5 1313 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 KRT38O76015 456 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 MX2P20592 715 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 SLC1A1P43005 524 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 SNRPFP62306 86 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 PIGHQ14442 188 aaPredicted RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 CRLF3Q8IUI8 442 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 ZNF513Q8N8E2 541 aaPredicted RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 IPMKQ8NFU5 416 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 PGLYRP2Q96PD5 576 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 PARD6BQ9BYG5 372 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 TMEM150BA6NC51 233 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 F5H5T6 163 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 SPTLC1O15269 473 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 CXCL8P10145 99 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 CHRNA3P32297 505 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 CCL23P55773 120 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 ADCY2Q08462 1091 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 EFEMP1Q12805 493 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 PDAP1Q13442 181 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 CUL2Q13617 745 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 KLHL38Q2WGJ6 581 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 C6orf118Q5T5N4 469 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 MORC4Q8TE76 937 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 ELMO2Q96JJ3 720 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 SYT17Q9BSW7 474 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 EPS15L1Q9UBC2 864 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 CNTNAP2Q9UHC6 1331 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 RASA4BC9J798 803 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 RASA4O43374 803 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 SMIM24O75264 130 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 GTF2A1P52655 376 aaPredicted RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 PTK2BQ14289 1009 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 FAM133BQ5BKY9 247 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 SARM1Q6SZW1 724 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 CBWD2Q8IUF1 395 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 CCDC33Q8N5R6 958 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 CCDC197Q8NCU1 140 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 GIPC2Q8TF65 315 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 EMILIN2Q9BXX0 1053 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 GPR63Q9BZJ6 419 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 C17orf75Q9HAS0 396 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 AGPAT5Q9NUQ2 364 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 MSRAQ9UJ68 235 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 ORC6Q9Y5N6 252 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 NR2E3Q9Y5X4 410 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 KPNA7A9QM74 516 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ZNF500O60304 480 aaPredicted RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 ASS1P00966 412 aaKnown RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 PNMA6AP0CW24 399 aaPredicted RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 TM4SF1P30408 202 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CCT5P48643 541 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 PMS2P54278 862 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CSE1LP55060 971 aaKnown RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 FAM171A1Q5VUB5 890 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 LLGL2Q6P1M3 1020 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CATSPERGQ6ZRH7 1159 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 DDIASQ8IXT1 998 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 REPS2Q8NFH8 660 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.62□□□□□ -1.51
LRP6-203ENST00000538239 AGR3Q8TD06 166 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 COPS5Q92905 334 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 RPRD1AQ96P16 312 aaPredicted RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 PURBQ96QR8 312 aaKnown RBP5.62□□□□□ -1.51
LRP6-203ENST00000538239 MED4Q9NPJ6 270 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 RNF19AQ9NV58 838 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 SUN2Q9UH99 717 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ZDHHC9Q9Y397 364 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ZNF541Q9H0D2 1346 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 A0A1W2PQC6 194 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 E2F8A0AVK6 867 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ACADMP11310 421 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 AVPR1AP37288 418 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 SLC26A2P50443 739 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 GALCP54803 685 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 INHBEP58166 350 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ZRANB3Q5FWF4 1079 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ZNF280DQ6N043 979 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 ARMC6Q6NXE6 501 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 CXCL17Q6UXB2 119 aa5.62□□□□□ -1.51
LRP6-203ENST00000538239 GPR142Q7Z601 462 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms