RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 PPEF2O14830 753 aa23.17■■□□□ 1.3
CCDC78-215ENST00000538176 TFAMQ00059 246 aaKnown RBP23.17■■□□□ 1.3
CCDC78-215ENST00000538176 EHHADHQ08426 723 aa23.17■■□□□ 1.3
CCDC78-215ENST00000538176 RNF19BQ6ZMZ0 732 aa23.17■■□□□ 1.3
CCDC78-215ENST00000538176 EFCAB13Q8IY85 973 aa23.17■■□□□ 1.3
CCDC78-215ENST00000538176 FGFBP2Q9BYJ0 223 aa23.17■■□□□ 1.3
CCDC78-215ENST00000538176 SLC2A4RGQ9NR83 387 aa23.17■■□□□ 1.3
CCDC78-215ENST00000538176 HCFC1R1Q9NWW0 138 aa23.17■■□□□ 1.3
CCDC78-215ENST00000538176 ITGA11Q9UKX5 1188 aa23.17■■□□□ 1.3
CCDC78-215ENST00000538176 SPTLC1O15269 473 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 ALDH1A3P47895 512 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 PSMD2Q13200 908 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 ASTLQ6HA08 431 aaPredicted RBP23.16■■□□□ 1.3
CCDC78-215ENST00000538176 PDZD4Q76G19 769 aaPredicted RBP23.16■■□□□ 1.3
CCDC78-215ENST00000538176 HS2ST1Q7LGA3 356 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 LRRC52Q8N7C0 313 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 ITFG1Q8TB96 612 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 C2orf15Q8WU43 125 aaKnown RBP23.16■■□□□ 1.3
CCDC78-215ENST00000538176 LEO1Q8WVC0 666 aaPredicted RBP23.16■■□□□ 1.3
CCDC78-215ENST00000538176 RSAD2Q8WXG1 361 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 GPR88Q9GZN0 384 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 SMOC2Q9H3U7 446 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 PCIF1Q9H4Z3 704 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 ASB3Q9Y575 518 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 NUMBLQ9Y6R0 609 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 DOCK6Q96HP0 2047 aa23.16■■□□□ 1.3
CCDC78-215ENST00000538176 TUFMP49411 452 aaKnown RBP23.15■■□□□ 1.3
CCDC78-215ENST00000538176 EPHB3P54753 998 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 PTPN5P54829 565 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 RBP5P82980 135 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 TWF1Q12792 350 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 CENPPQ6IPU0 288 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 NPAS3Q8IXF0 933 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 SPATA18Q8TC71 538 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 BORCS6Q96GS4 357 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 ANKRD36BP1Q96IX9 119 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 RTP3Q9BQQ7 232 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 CORO1BQ9BR76 489 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 ZDBF2Q9HCK1 2354 aa23.15■■□□□ 1.3
CCDC78-215ENST00000538176 GOLGA8IPA6NC78 632 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 GOLGA8JA6NMD2 632 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 PRPF40AO75400 957 aaKnown RBP23.14■■□□□ 1.29
CCDC78-215ENST00000538176 TMEM191BP0C7N4 346 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 AFMP43652 599 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 EPHA5P54756 1037 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 BMT2Q1RMZ1 405 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 CSGALNACT2Q8N6G5 542 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 GOLGA5Q8TBA6 731 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 NOC3LQ8WTT2 800 aaKnown RBP23.14■■□□□ 1.29
CCDC78-215ENST00000538176 HPS3Q969F9 1004 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 ASAH2Q9NR71 780 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 HSPBP1Q9NZL4 362 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 AGAP1Q9UPQ3 857 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 ZDHHC9Q9Y397 364 aa23.14■■□□□ 1.29
CCDC78-215ENST00000538176 TULP1O00294 542 aaPredicted RBP23.13■■□□□ 1.29
CCDC78-215ENST00000538176 FGF19O95750 216 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 ITGB3P05106 788 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 PFKPQ01813 784 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 MYO1EQ12965 1108 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 DUSP4Q13115 394 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 DUOXA2Q1HG44 320 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 PRSS36Q5K4E3 855 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 PARM1Q6UWI2 310 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 DCP1BQ8IZD4 617 aaKnown RBP23.13■■□□□ 1.29
CCDC78-215ENST00000538176 TMEM86AQ8N2M4 240 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 TMEM130Q8N3G9 435 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 C1orf127Q8N9H9 656 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 SCFD1Q8WVM8 642 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 FGF14Q92915 247 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 SHDQ96IW2 340 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 ZCWPW1Q9H0M4 648 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 BLZF1Q9H2G9 400 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 PDE11AQ9HCR9 933 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 GDAP2Q9NXN4 497 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 SERTAD1Q9UHV2 236 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 SCN1AP35498 2009 aa23.13■■□□□ 1.29
CCDC78-215ENST00000538176 MTMR11A4FU01 709 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 NARSO43776 548 aaKnown RBP23.12■■□□□ 1.29
CCDC78-215ENST00000538176 HUS1O60921 280 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 ECI2O75521 394 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 PDGFBP01127 241 aaPredicted RBP23.12■■□□□ 1.29
CCDC78-215ENST00000538176 TNNC2P02585 160 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 CFHP08603 1231 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 POLR2BP30876 1174 aaKnown RBP23.12■■□□□ 1.29
CCDC78-215ENST00000538176 HOXD13P35453 343 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 CUL4BQ13620 913 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 KNOP1Q1ED39 458 aaKnown RBP23.12■■□□□ 1.29
CCDC78-215ENST00000538176 DPH6Q7L8W6 267 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 ITIH5Q86UX2 942 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 WDR49Q8IV35 697 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 C12orf56Q8IXR9 622 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 SIX5Q8N196 739 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 XXYLT1Q8NBI6 393 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 GLIS3Q8NEA6 775 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 SPPL2BQ8TCT7 592 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 PAGE5Q96GU1 130 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 CCDC34Q96HJ3 373 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 PGLYRP2Q96PD5 576 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 NOTCH4Q99466 2003 aa23.12■■□□□ 1.29
CCDC78-215ENST00000538176 AGPAT3Q9NRZ7 376 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms