RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 AGAP1Q9UPQ3 857 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 PTPRDP23468 1912 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 DENND4CQ5VZ89 1909 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 KPNA7A9QM74 516 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 DCXO43602 365 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 MOSPD3O75425 235 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 MYL1P05976 194 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 ATF2P15336 505 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 HOXA9P31269 272 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 CCR2P41597 374 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 ARPP19P56211 112 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 MCCD1P59942 119 aaPredicted RBP9.07□□□□□ -0.96
SPARC-208ENST00000538026 SNRPFP62306 86 aaKnown RBP9.07□□□□□ -0.96
SPARC-208ENST00000538026 DLG4P78352 724 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 CLDN10P78369 228 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 CREMQ03060 361 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 YWHAHQ04917 246 aaPredicted RBP9.07□□□□□ -0.96
SPARC-208ENST00000538026 KCNB1Q14721 858 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 PSMD6Q15008 389 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 SLC5A9Q2M3M2 681 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 UVSSAQ2YD98 709 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 ZCWPW2Q504Y3 356 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 DSTYKQ6XUX3 929 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 TRAPPC11Q7Z392 1133 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 SLC9A9Q8IVB4 645 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 TCEAL8Q8IYN2 117 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 ZDHHC14Q8IZN3 488 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 CSGALNACT2Q8N6G5 542 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 XXYLT1Q8NBI6 393 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 ATAD1Q8NBU5 361 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 APPL2Q8NEU8 664 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 ITFG1Q8TB96 612 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 NOC3LQ8WTT2 800 aaKnown RBP9.07□□□□□ -0.96
SPARC-208ENST00000538026 RSAD2Q8WXG1 361 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 CCDC127Q96BQ5 260 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 PKMYT1Q99640 499 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 LRFN3Q9BTN0 628 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 RPP25Q9BUL9 199 aaKnown RBP9.07□□□□□ -0.96
SPARC-208ENST00000538026 LRRC3Q9BY71 257 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 DNAJC25Q9H1X3 360 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 TSHZ2Q9NRE2 1034 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 EXOC1Q9NV70 894 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 CEP72Q9P209 647 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 L1RE1Q9UN81 338 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 USTQ9Y2C2 406 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 SLC27A5Q9Y2P5 690 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 GREB1Q4ZG55 1949 aa9.07□□□□□ -0.96
SPARC-208ENST00000538026 CLUHO75153 1309 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 LRRIQ3A6PVS8 624 aaPredicted RBP9.06□□□□□ -0.96
SPARC-208ENST00000538026 H7C4K7 107 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 PDXKO00764 312 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 GABRDO14764 452 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 KIAA0391O15091 583 aaKnown RBP9.06□□□□□ -0.96
SPARC-208ENST00000538026 XPOTO43592 962 aaKnown RBP9.06□□□□□ -0.96
SPARC-208ENST00000538026 GPR37L1O60883 481 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 LRRN2O75325 713 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 SOAT2O75908 522 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 AKAP3O75969 853 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 C4BPAP04003 597 aaKnown RBP9.06□□□□□ -0.96
SPARC-208ENST00000538026 POU2F2P09086 479 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 HNRNPA1P09651 372 aaKnown RBP eCLIP9.06□□□□□ -0.96
SPARC-208ENST00000538026 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
SPARC-208ENST00000538026 TAF6P49848 677 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 PMS1P54277 932 aaKnown RBP9.06□□□□□ -0.96
SPARC-208ENST00000538026 ZXDAP98168 799 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 FAM160A1Q05DH4 1040 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 ADCY1Q08828 1119 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 DUSP4Q13115 394 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 GPR17Q13304 367 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 SOWAHAQ2M3V2 549 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 PPM1LQ5SGD2 360 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 TPGS2Q68CL5 300 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 OVOS1Q6IE37 1185 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 CENPPQ6IPU0 288 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 ZNF280DQ6N043 979 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 CYP26C1Q6V0L0 522 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 STXBP4Q6ZWJ1 553 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 WDR49Q8IV35 697 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 HS6ST3Q8IZP7 471 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 GUF1Q8N442 669 aaKnown RBP9.06□□□□□ -0.96
SPARC-208ENST00000538026 PDCL2Q8N4E4 241 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 PARD3BQ8TEW8 1205 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 KBTBD7Q8WVZ9 684 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 EDAQ92838 391 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 TCEAL4Q96EI5 215 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 ASIC4Q96FT7 647 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 EEF2KMTQ96G04 330 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 PGLYRP2Q96PD5 576 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 ZCWPW1Q9H0M4 648 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 XYLT2Q9H1B5 865 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 CYP4F11Q9HBI6 524 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 GDAP2Q9NXN4 497 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 EPS15L1Q9UBC2 864 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 AFF4Q9UHB7 1163 aaKnown RBP9.06□□□□□ -0.96
SPARC-208ENST00000538026 TRAF3IP3Q9Y228 551 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 PCDHA5Q9Y5H7 936 aa9.06□□□□□ -0.96
SPARC-208ENST00000538026 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.06□□□□□ -0.96
SPARC-208ENST00000538026 ZNF638Q14966 1978 aaKnown RBP9.05□□□□□ -0.96
SPARC-208ENST00000538026 MTMR11A4FU01 709 aa9.05□□□□□ -0.96
SPARC-208ENST00000538026 OR6C75A6NL08 312 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms