RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.42
SNHG1-206ENST00000537925 FBXL18Q96ME1 805 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 DNAJC7Q99615 494 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 DESI2Q9BSY9 194 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 HERC2P3Q9BVR0 1158 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 GPR62Q9BZJ7 368 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 ENTPD7Q9NQZ7 604 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 TUBGCP4Q9UGJ1 667 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 CDC23Q9UJX2 597 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 UBQLN1Q9UMX0 589 aaKnown RBP12.4□□□□□ -0.42
SNHG1-206ENST00000537925 DERAQ9Y315 318 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 FHOD1Q9Y613 1164 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 IRAK3Q9Y616 596 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 TSC2P49815 1807 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 VCANP13611 3396 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 GOLGA8IPA6NC78 632 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 C2orf71A6NGG8 1288 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 GOLGA8JA6NMD2 632 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 HIDE1A8MVS5 230 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 PDXKO00764 312 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 CLIC2O15247 247 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 XPOTO43592 962 aaKnown RBP12.4□□□□□ -0.43
SNHG1-206ENST00000537925 TADA2AO75478 443 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 IL18RAPO95256 599 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 PNMA6AP0CW24 399 aaPredicted RBP12.4□□□□□ -0.43
SNHG1-206ENST00000537925 IGFBP6P24592 240 aaPredicted RBP12.4□□□□□ -0.43
SNHG1-206ENST00000537925 CCNE1P24864 410 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 LRPAP1P30533 357 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 HYAL1Q12794 435 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 BRD3Q15059 726 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 MEA1Q16626 185 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 JADE1Q6IE81 842 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 TAS1R1Q7RTX1 841 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 C3orf58Q8NDZ4 430 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 GOLGA5Q8TBA6 731 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 PPP2R3CQ969Q6 453 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 FAM212AQ96EL1 285 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 KIAA1586Q9HCI6 787 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 CHST7Q9NS84 486 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 TAB2Q9NYJ8 693 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 RBAKQ9NYW8 714 aaPredicted RBP12.4□□□□□ -0.43
SNHG1-206ENST00000537925 MAGEC2Q9UBF1 373 aaPredicted RBP12.4□□□□□ -0.43
SNHG1-206ENST00000537925 CAPN11Q9UMQ6 739 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 C2CD2Q9Y426 696 aa12.4□□□□□ -0.43
SNHG1-206ENST00000537925 SF3B1O75533 1304 aaKnown RBP eCLIP12.39□□□□□ -0.432e-7■■■■■ 35.3
SNHG1-206ENST00000537925 CTAGE9A4FU28 777 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 CCDC151A5D8V7 595 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 PODXLO00592 558 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 LILRB3O75022 631 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 B3GAT3O94766 335 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 CXCL14O95715 111 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 NFICP08651 508 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 WNT7BP56706 349 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 CDK17Q00537 523 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 TMEM132DQ14C87 1099 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 WHAMMP3Q1A5X7 153 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 KIAA0319Q5VV43 1072 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 NT5DC4Q86YG4 428 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 CBWD2Q8IUF1 395 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 SLC9A9Q8IVB4 645 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 EFCAB13Q8IY85 973 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 GPR65Q8IYL9 337 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 XXYLT1Q8NBI6 393 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 OR8K1Q8NGG5 319 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 HASPINQ8TF76 798 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 HNRNPLLQ8WVV9 542 aaKnown RBP12.39□□□□□ -0.43
SNHG1-206ENST00000537925 AUTS2Q8WXX7 1259 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 DMAC2Q9NW81 257 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 TRAF3IP3Q9Y228 551 aa12.39□□□□□ -0.43
SNHG1-206ENST00000537925 TCF20Q9UGU0 1960 aaKnown RBP12.38□□□□□ -0.43
SNHG1-206ENST00000537925 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.38□□□□□ -0.43
SNHG1-206ENST00000537925 A0A1W2PQJ5 194 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 NCK2O43639 380 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 KRT9P35527 623 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 ARHGAP25P42331 645 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 NRIP1P48552 1158 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 GLUD2P49448 558 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 CYP2J2P51589 502 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 DSG1Q02413 1049 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 UBXN1Q04323 297 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 ELAVL2Q12926 359 aaKnown RBP12.38□□□□□ -0.43
SNHG1-206ENST00000537925 KCNC3Q14003 757 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 SKIV2LQ15477 1246 aaKnown RBP12.38□□□□□ -0.43
SNHG1-206ENST00000537925 TERF2Q15554 542 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 NFIL3Q16649 462 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 DUSP6Q16828 381 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 USP41Q3LFD5 358 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 RBM23Q86U06 439 aaKnown RBP12.38□□□□□ -0.43
SNHG1-206ENST00000537925 TMEM130Q8N3G9 435 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 EHBP1Q8NDI1 1231 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 BEST2Q8NFU1 509 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 PABPC5Q96DU9 382 aaKnown RBP12.38□□□□□ -0.43
SNHG1-206ENST00000537925 CDCA3Q99618 268 aaPredicted RBP12.38□□□□□ -0.43
SNHG1-206ENST00000537925 NAPGQ99747 312 aaPredicted RBP12.38□□□□□ -0.43
SNHG1-206ENST00000537925 UBXN6Q9BZV1 441 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 TTYH3Q9C0H2 523 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 VPS16Q9H269 839 aa12.38□□□□□ -0.43
SNHG1-206ENST00000537925 HAUS4Q9H6D7 363 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms