RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 APOL6Q9BWW8 343 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 KIAA1586Q9HCI6 787 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ST3GAL5Q9UNP4 418 aa13.85□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GOLGA6CA6NDK9 693 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 HSF2BPO75031 334 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 NFICP08651 508 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GOLGA6DP0CG33 693 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 RFX1P22670 979 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CARSP49589 748 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 EPC2Q52LR7 807 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TDRD10Q5VZ19 366 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SV2AQ7L0J3 742 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 IQCKQ8N0W5 287 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 LMO3Q8TAP4 145 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 WHAMMQ8TF30 809 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 FNBP1Q96RU3 617 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CGRRF1Q99675 332 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ADPGKQ9BRR6 497 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MTMR12Q9C0I1 747 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 INTS2Q9H0H0 1204 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 EPB41L5Q9HCM4 733 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GOLGA6AQ9NYA3 693 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SCN1AP35498 2009 aa13.84□□□□□ -0.19
CDK5RAP3-202ENST00000536708 A6NNZ2 444 aa13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MEIS3P2A8K0S8 358 aa13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 F8VZ95 297 aa13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MGEA5O60502 916 aa13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 IBSPP21815 317 aaPredicted RBP13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CORO7P57737 925 aa13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MRPS25P82663 173 aaKnown RBP13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PKN2Q16513 984 aaKnown RBP13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TUBB8Q3ZCM7 444 aa13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TRIM60Q495X7 471 aa13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TTC31Q49AM3 519 aaPredicted RBP13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TWF2Q6IBS0 349 aaKnown RBP13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 KRT12Q99456 494 aa13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 HINFPQ9BQA5 517 aa13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PI4K2AQ9BTU6 479 aa13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SNTG2Q9NY99 539 aa13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TTC7AQ9ULT0 858 aaPredicted RBP13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PACSIN2Q9UNF0 486 aaPredicted RBP13.83□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TDRD15B5MCY1 1934 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 CCDC188H7C350 402 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 NCANO14594 1321 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 KCNK3O14649 394 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 EVI5O60447 810 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 CD4P01730 458 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 CCDC172P0C7W6 258 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 COL6A1P12109 1028 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 AKAP5P24588 427 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 GJA8P48165 433 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 MCCD1P59942 119 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 CLDN10P78369 228 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 SKOR1P84550 965 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 GUCY2DQ02846 1103 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 SLC10A6Q3KNW5 377 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 DCAF4L1Q3SXM0 396 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 ARHGEF19Q8IW93 802 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 LNX1Q8TBB1 728 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 CASKIN2Q8WXE0 1202 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 GPR88Q9GZN0 384 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 ISCUQ9H1K1 167 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 RNF39Q9H2S5 420 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 TMEM8AQ9HCN3 771 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 PADI3Q9ULW8 664 aa13.83□□□□□ -0.2
CDK5RAP3-202ENST00000536708 MROH7Q68CQ1 1323 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 LACTBL1A8MY62 500 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 RAD51CO43502 376 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 VNN1O95497 513 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 TMEM253P0C7T8 217 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 GUCY2FP51841 1108 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 BIRC3Q13489 604 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 DRAP1Q14919 205 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 EMC10Q5UCC4 262 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 KRT39Q6A163 491 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 JADE1Q6IE81 842 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 SLC39A5Q6ZMH5 540 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 C15orf39Q6ZRI6 1047 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 HES6Q96HZ4 224 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.82□□□□□ -0.24e-16■□□□□ 11
CDK5RAP3-202ENST00000536708 TRIM6Q9C030 488 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 MCOLN1Q9GZU1 580 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 RPF1Q9H9Y2 349 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 ERVK-5Q9HDB9 667 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 DNAJC12Q9UKB3 198 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 NFU1Q9UMS0 254 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 P4HA2O15460 535 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 RECQL4O94761 1208 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 CLTAP09496 248 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 GRM5P41594 1212 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 GALCP54803 685 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 TFAMQ00059 246 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 PCBP1Q15365 356 aaKnown RBP eCLIP13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 ZACNQ401N2 412 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 FAM26DQ5JW98 314 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 GLRA4Q5JXX5 417 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 PHLDB3Q6NSJ2 640 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 NT5DC3Q86UY8 548 aa13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 SMG8Q8ND04 991 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-202ENST00000536708 KAT5Q92993 513 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms