RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 TMEM191BP0C7N4 346 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 DMDP11532 3685 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 CLCNKBP51801 687 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 NLRP12P59046 1061 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 FKBP3Q00688 224 aaKnown RBP13.69□□□□□ -0.22
DDB1-207ENST00000535967 SPAG1Q07617 926 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 SIGLEC14Q08ET2 396 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 BMS1Q14692 1282 aaKnown RBP13.69□□□□□ -0.22
DDB1-207ENST00000535967 CEP135Q66GS9 1140 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 FUT10Q6P4F1 479 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 SYCE2Q6PIF2 218 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 NELFBQ8WX92 580 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 FNBP1Q96RU3 617 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 CGRRF1Q99675 332 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 PAAF1Q9BRP4 392 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 ZBP1Q9H171 429 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 PDE11AQ9HCR9 933 aa13.69□□□□□ -0.22
DDB1-207ENST00000535967 HIDE1A8MVS5 230 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 TRAPPC3O43617 180 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 SOD2P04179 222 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 PSMC2P35998 433 aaKnown RBP13.68□□□□□ -0.22
DDB1-207ENST00000535967 AP3M2P53677 418 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 WNT7BP56706 349 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 ADAM9Q13443 819 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 PTPN21Q16825 1174 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 SKOR2Q2VWA4 1001 aaPredicted RBP13.68□□□□□ -0.22
DDB1-207ENST00000535967 CT47A1Q5JQC4 288 aaPredicted RBP13.68□□□□□ -0.22
DDB1-207ENST00000535967 PLPP4Q5VZY2 271 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 ANKRD40Q6AI12 368 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 KLHL10Q6JEL2 608 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 LLGL2Q6P1M3 1020 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 INTS8Q75QN2 995 aaKnown RBP13.68□□□□□ -0.22
DDB1-207ENST00000535967 GPR65Q8IYL9 337 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 RDH13Q8NBN7 331 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 ANKRD36BP1Q96IX9 119 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 ZNF560Q96MR9 790 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 CEP63Q96MT8 703 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 KRTAP3-3Q9BYR6 98 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 KRTAP3-2Q9BYR7 98 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 NGRNQ9NPE2 291 aaKnown RBP13.68□□□□□ -0.22
DDB1-207ENST00000535967 INTS13Q9NVM9 706 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 DPP3Q9NY33 737 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 TMEM63CQ9P1W3 806 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 CACNG4Q9UBN1 327 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 ITGA11Q9UKX5 1188 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 SSX2IPQ9Y2D8 614 aa13.68□□□□□ -0.22
DDB1-207ENST00000535967 ANO9A1A5B4 782 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 FSD2A1L4K1 749 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 TRIM49BA6NDI0 452 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 TADA2AO75478 443 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 B3GAT3O94766 335 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 TNNC2P02585 160 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 CTSAP10619 480 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 EPB41P11171 864 aaKnown RBP13.67□□□□□ -0.22
DDB1-207ENST00000535967 KRT13P13646 458 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 AVPR2P30518 371 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 PNPLA4P41247 253 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 CASP4P49662 377 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 PMS1P54277 932 aaKnown RBP13.67□□□□□ -0.22
DDB1-207ENST00000535967 CLDN10P78369 228 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 TFAMQ00059 246 aaKnown RBP13.67□□□□□ -0.22
DDB1-207ENST00000535967 SMC1AQ14683 1233 aaKnown RBP13.67□□□□□ -0.22
DDB1-207ENST00000535967 TTI2Q6NXR4 508 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 FAM186BQ8IYM0 893 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 VPS52Q8N1B4 723 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 C3orf58Q8NDZ4 430 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 PARD3BQ8TEW8 1205 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 TCF25Q9BQ70 676 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 VN1R3Q9BXE9 311 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 ENTPD7Q9NQZ7 604 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 RWDD2AQ9UIY3 292 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 NUB1Q9Y5A7 615 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 IRAK3Q9Y616 596 aa13.67□□□□□ -0.22
DDB1-207ENST00000535967 EP300Q09472 2414 aaPredicted RBP13.67□□□□□ -0.22
DDB1-207ENST00000535967 PTPRJQ12913 1337 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 F8W810 466 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 PIRO00625 290 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 AKAP3O75969 853 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 URODP06132 367 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 DLATP10515 647 aaKnown RBP13.66□□□□□ -0.22
DDB1-207ENST00000535967 TNNI1P19237 187 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 GLUD2P49448 558 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 AARSP49588 968 aaKnown RBP eCLIP13.66□□□□□ -0.22
DDB1-207ENST00000535967 MCCD1P59942 119 aaPredicted RBP13.66□□□□□ -0.22
DDB1-207ENST00000535967 CREMQ03060 361 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 BFSP1Q12934 665 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 DUOXA2Q1HG44 320 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 USP41Q3LFD5 358 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 DPCR1Q3MIW9 517 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 C9orf57Q5W0N0 161 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 ANKRD54Q6NXT1 300 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 CAVIN1Q6NZI2 390 aaKnown RBP13.66□□□□□ -0.22
DDB1-207ENST00000535967 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 SASS6Q6UVJ0 657 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 TMEM184AQ6ZMB5 413 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.66□□□□□ -0.22
DDB1-207ENST00000535967 TMC7Q7Z402 723 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 LRRC52Q8N7C0 313 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 FEZF2Q8TBJ5 459 aa13.66□□□□□ -0.22
DDB1-207ENST00000535967 HASPINQ8TF76 798 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms