RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 FGFR1P11362 822 aa24.5■■□□□ 1.51
RBFOX1-206ENST00000535565 MFSD5Q6N075 450 aa24.5■■□□□ 1.51
RBFOX1-206ENST00000535565 KIAA1328Q86T90 577 aa24.5■■□□□ 1.51
RBFOX1-206ENST00000535565 NOP9Q86U38 636 aaKnown RBP24.5■■□□□ 1.51
RBFOX1-206ENST00000535565 ZNF677Q86XU0 584 aa24.5■■□□□ 1.51
RBFOX1-206ENST00000535565 RPUSD2Q8IZ73 545 aaKnown RBP24.5■■□□□ 1.51
RBFOX1-206ENST00000535565 PPP1R13BQ96KQ4 1090 aa24.5■■□□□ 1.51
RBFOX1-206ENST00000535565 SEPT11Q9NVA2 429 aaKnown RBP24.5■■□□□ 1.51
RBFOX1-206ENST00000535565 GDAP2Q9NXN4 497 aa24.5■■□□□ 1.51
RBFOX1-206ENST00000535565 NOCTQ9UK39 431 aaKnown RBP24.5■■□□□ 1.51
RBFOX1-206ENST00000535565 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 USP27XA6NNY8 438 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 PFKMP08237 780 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 GNA15P30679 374 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 CLCNKBP51801 687 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 ZNF132P52740 706 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 LILRA4P59901 499 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 CYP27A1Q02318 531 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 NPAS4Q8IUM7 802 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 GLYCTKQ8IVS8 523 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 SLC20A1Q8WUM9 679 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 RSPH1Q8WYR4 309 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 SYT11Q9BT88 431 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 SDCBP2Q9H190 292 aa24.49■■□□□ 1.51
RBFOX1-206ENST00000535565 CASTOR2A6NHX0 329 aa24.48■■□□□ 1.51
RBFOX1-206ENST00000535565 ITGB8P26012 769 aa24.48■■□□□ 1.51
RBFOX1-206ENST00000535565 CDH8P55286 799 aa24.48■■□□□ 1.51
RBFOX1-206ENST00000535565 CDR2Q01850 454 aa24.48■■□□□ 1.51
RBFOX1-206ENST00000535565 C10orf76Q5T2E6 689 aa24.48■■□□□ 1.51
RBFOX1-206ENST00000535565 ACP6Q9NPH0 428 aa24.48■■□□□ 1.51
RBFOX1-206ENST00000535565 REXO2Q9Y3B8 237 aaKnown RBP24.48■■□□□ 1.51
RBFOX1-206ENST00000535565 PCDHA13Q9Y5I0 950 aa24.48■■□□□ 1.51
RBFOX1-206ENST00000535565 DDX3XO00571 662 aaKnown RBP eCLIP24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 ZNF263O14978 683 aa24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 CSF2RAP15509 400 aa24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 RNASELQ05823 741 aaKnown RBP24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 INCA1Q0VD86 236 aa24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 UPP1Q16831 310 aa24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 TAF3Q5VWG9 929 aa24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 REXO1L1PQ8IX06 675 aa24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 LNX1Q8TBB1 728 aaPredicted RBP24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 FAM193BQ96PV7 902 aaPredicted RBP24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 NAGPAQ9UK23 515 aa24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 BARX2Q9UMQ3 279 aaPredicted RBP24.47■■□□□ 1.51
RBFOX1-206ENST00000535565 ABHD14A-ACY1A0A1B0GW23 586 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 HUS1O60921 280 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 CILPO75339 1184 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 PAX3P23760 479 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 MAGEA1P43355 309 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 VAV2P52735 878 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 ZNF394Q53GI3 561 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 CCDC122Q5T0U0 273 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 ALKBH5Q6P6C2 394 aaKnown RBP24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 APPL2Q8NEU8 664 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 SLC30A5Q8TAD4 765 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 FNDC1Q4ZHG4 1894 aaPredicted RBP24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 SPTLC1O15269 473 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 EFCAB14O75071 495 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 PAEPP09466 180 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 ARHGAP29Q52LW3 1261 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 DPH6Q7L8W6 267 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 DDX1Q92499 740 aaKnown RBP24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 DNAI2Q9GZS0 605 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 TBC1D13Q9NVG8 400 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 CACNG4Q9UBN1 327 aa24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 PUF60Q9UHX1 559 aaKnown RBP24.46■■□□□ 1.51
RBFOX1-206ENST00000535565 THAP12O43422 761 aa24.45■■□□□ 1.5
RBFOX1-206ENST00000535565 MMEP08473 750 aa24.45■■□□□ 1.5
RBFOX1-206ENST00000535565 FMO1Q01740 532 aa24.45■■□□□ 1.5
RBFOX1-206ENST00000535565 SOWAHAQ2M3V2 549 aa24.45■■□□□ 1.5
RBFOX1-206ENST00000535565 CRIPAKQ8N1N5 446 aa24.45■■□□□ 1.5
RBFOX1-206ENST00000535565 TOP6BLQ8N6T0 577 aa24.45■■□□□ 1.5
RBFOX1-206ENST00000535565 VWCEQ96DN2 955 aa24.45■■□□□ 1.5
RBFOX1-206ENST00000535565 MRPL9Q9BYD2 267 aaKnown RBP24.45■■□□□ 1.5
RBFOX1-206ENST00000535565 TSGA10Q9BZW7 698 aa24.45■■□□□ 1.5
RBFOX1-206ENST00000535565 PDCL3Q9H2J4 239 aa24.45■■□□□ 1.5
RBFOX1-206ENST00000535565 TACC1O75410 805 aa24.44■■□□□ 1.5
RBFOX1-206ENST00000535565 CHRNB2P17787 502 aa24.44■■□□□ 1.5
RBFOX1-206ENST00000535565 RAD23BP54727 409 aa24.44■■□□□ 1.5
RBFOX1-206ENST00000535565 DSC1Q08554 894 aa24.44■■□□□ 1.5
RBFOX1-206ENST00000535565 OLIG1Q8TAK6 271 aa24.44■■□□□ 1.5
RBFOX1-206ENST00000535565 TMEM176AQ96HP8 235 aa24.44■■□□□ 1.5
RBFOX1-206ENST00000535565 NT5C1AQ9BXI3 368 aa24.44■■□□□ 1.5
RBFOX1-206ENST00000535565 CYB561D2O14569 222 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 KRT86O43790 486 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 B3GAT3O94766 335 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 NDST1P52848 882 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 KIF5AQ12840 1032 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 DCLRE1AQ6PJP8 1040 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 DSTYKQ6XUX3 929 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 ZNF662Q6ZS27 426 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 UNC93AQ86WB7 457 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 CASD1Q96PB1 797 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 MRPL45Q9BRJ2 306 aaKnown RBP24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 PAAF1Q9BRP4 392 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 LZTFL1Q9NQ48 299 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 NENFQ9UMX5 172 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 ATP8B3O60423 1300 aa24.43■■□□□ 1.5
RBFOX1-206ENST00000535565 MED7O43513 233 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms