RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ADSSP30520 456 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 CCR2P41597 374 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 ALDH1A3P47895 512 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 TAF6P49848 677 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 EPHA5P54756 1037 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 ALCAMQ13740 583 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 FAM78AQ5JUQ0 283 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 METTL23Q86XA0 190 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 PDILTQ8N807 584 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 NKD2Q969F2 451 aaPredicted RBP17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 ZNF396Q96N95 335 aaPredicted RBP17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 PLA2G2FQ9BZM2 168 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 IKZF4Q9H2S9 585 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 OLFML3Q9NRN5 406 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 PANK4Q9NVE7 773 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 VPS13AQ96RL7 3174 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 VNN2O95498 520 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 CYP11A1P05108 521 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 KCNA1Q09470 495 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 UBXN2BQ14CS0 331 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 CENPPQ6IPU0 288 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 POTEHQ6S545 545 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 CRELD2Q6UXH1 353 aaPredicted RBP17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 NT5DC4Q86YG4 428 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 LINC00301Q8NCQ3 95 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 SMARCD2Q92925 531 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 ASB16Q96NS5 453 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 PYM1Q9BRP8 204 aaKnown RBP17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 FAM213AQ9BRX8 229 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 DDX23Q9BUQ8 820 aaKnown RBP17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 SLITRK6Q9H5Y7 841 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 DLGAP2Q9P1A6 1054 aa17.5■□□□□ 0.39
CLSTN3-204ENST00000535313 A0A087X0B3 334 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 FRMD3A2A2Y4 597 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 MTMR11A4FU01 709 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 PRR23AA6NEV1 266 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 CYB561D2O14569 222 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 SPTLC2O15270 562 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 LDHAP00338 332 aaKnown RBP17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 GJA1P17302 382 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 FCARP24071 287 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 ASCL5Q7RTU5 278 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 C1orf210Q8IVY1 113 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 CCDC65Q8IXS2 484 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 EFCAB13Q8IY85 973 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 THEM5Q8N1Q8 247 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 ATAD1Q8NBU5 361 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 SNX21Q969T3 373 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 ZSWIM3Q96MP5 696 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 ZNF560Q96MR9 790 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 TRMT61BQ9BVS5 477 aaKnown RBP17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 BCO2Q9BYV7 579 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 LRRC27Q9C0I9 530 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 GPR88Q9GZN0 384 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 CRISPLD1Q9H336 500 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 TMEM206Q9H813 350 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 BRD9Q9H8M2 597 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 HSFX1Q9UBD0 423 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 SLC27A5Q9Y2P5 690 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 ASB3Q9Y575 518 aa17.49■□□□□ 0.39
CLSTN3-204ENST00000535313 FAM170BA6NMN3 283 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 PPP6R2O75170 966 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 MOSPD3O75425 235 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 GARTP22102 1010 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 PNPLA4P41247 253 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 CASP5P51878 434 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 TFAMQ00059 246 aaKnown RBP17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 GRM2Q14416 872 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 TEAD2Q15562 447 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 SV2CQ496J9 727 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 SLC39A12Q504Y0 691 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 ZNF852Q6ZMS4 543 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 TPRG1Q6ZUI0 275 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 STXBP4Q6ZWJ1 553 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 ITIH5Q86UX2 942 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 OR10T2Q8NGX3 314 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 SHKBP1Q8TBC3 707 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 ZSCAN18Q8TBC5 510 aaPredicted RBP17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 CACTINQ8WUQ7 758 aaKnown RBP17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 DNASE1L2Q92874 299 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 SAAL1Q96ER3 474 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 TMEM209Q96SK2 561 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 NELL2Q99435 816 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 OSBPL6Q9BZF3 934 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 DNAJC25Q9H1X3 360 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 TNMDQ9H2S6 317 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 LTB4R2Q9NPC1 389 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 RBAKQ9NYW8 714 aaPredicted RBP17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 TFIP11Q9UBB9 837 aaKnown RBP17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 MRPS17Q9Y2R5 130 aaKnown RBP17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 FAM186AA6NE01 2351 aa17.48■□□□□ 0.39
CLSTN3-204ENST00000535313 DMDP11532 3685 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 KPNA7A9QM74 516 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 NRG2O14511 850 aaPredicted RBP17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 NCAM2O15394 837 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 LRRN2O75325 713 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 FGF19O95750 216 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 PDIA4P13667 645 aaKnown RBP17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 GLULP15104 373 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms