RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 DKC1O60832 514 aaKnown RBP eCLIP9.58□□□□□ -0.88
SF3B2-216ENST00000534765 CELF2O95319 508 aaKnown RBP9.58□□□□□ -0.88
SF3B2-216ENST00000534765 LRRC36Q1X8D7 754 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 PRAMEF19Q5SWL8 479 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 CASKIN2Q8WXE0 1202 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 TMEM237Q96Q45 408 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 SENP7Q9BQF6 1050 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 NDEL1Q9GZM8 345 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 ZWILCHQ9H900 591 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 TBC1D22BQ9NU19 505 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 ETNK2Q9NVF9 386 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 CNOT8Q9UFF9 292 aaKnown RBP9.58□□□□□ -0.88
SF3B2-216ENST00000534765 DBR1Q9UK59 544 aaKnown RBP9.58□□□□□ -0.88
SF3B2-216ENST00000534765 MAFBQ9Y5Q3 323 aaPredicted RBP9.58□□□□□ -0.88
SF3B2-216ENST00000534765 LYPLA2O95372 231 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 ZNF24P17028 368 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 NFKBIAP25963 317 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 HSD17B3P37058 310 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 POLR2FP61218 127 aaKnown RBP9.57□□□□□ -0.88
SF3B2-216ENST00000534765 PSMC5P62195 406 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 WDR78Q5VTH9 848 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 CCDC62Q6P9F0 684 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 DAAM2Q86T65 1068 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 ZNF653Q96CK0 615 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 MRRFQ96E11 262 aaKnown RBP9.57□□□□□ -0.88
SF3B2-216ENST00000534765 MPP4Q96JB8 637 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 CENPKQ9BS16 269 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 RNPEPQ9H4A4 650 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 GOLPH3Q9H4A6 298 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 TYW1Q9NV66 732 aaKnown RBP9.57□□□□□ -0.88
SF3B2-216ENST00000534765 CTTNBP2NLQ9P2B4 639 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 SEPT9Q9UHD8 586 aaPredicted RBP9.57□□□□□ -0.88
SF3B2-216ENST00000534765 CAPN6Q9Y6Q1 641 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 TCP11X1B4DZS4 312 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 PDXKO00764 312 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 STAMBPO95630 424 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 RASSF2P50749 326 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 PHLDB3Q6NSJ2 640 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 TAPT1Q6NXT6 567 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 C6orf89Q6UWU4 347 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 HAUS6Q7Z4H7 955 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 CDR2LQ86X02 465 aaPredicted RBP9.57□□□□□ -0.88
SF3B2-216ENST00000534765 ATP11CQ8NB49 1132 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 SMC1BQ8NDV3 1235 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 SEMA4DQ92854 862 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 MAP3K20Q9NYL2 800 aaKnown RBP9.57□□□□□ -0.88
SF3B2-216ENST00000534765 ADAM22Q9P0K1 906 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 MYPNQ86TC9 1320 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 TRIP12Q14669 1992 aaPredicted RBP9.57□□□□□ -0.88
SF3B2-216ENST00000534765 CXCL11O14625 94 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 TBCAO75347 108 aaKnown RBP9.57□□□□□ -0.88
SF3B2-216ENST00000534765 SUPT20HL2P0C7V6 817 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 TUFMP49411 452 aaKnown RBP9.57□□□□□ -0.88
SF3B2-216ENST00000534765 NCKAP1LP55160 1127 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 COPS2P61201 443 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 ZBTB16Q05516 673 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 EDRF1Q3B7T1 1238 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 NLRX1Q86UT6 975 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 VPS52Q8N1B4 723 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 NPLOC4Q8TAT6 608 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 CEP170P1Q96L14 293 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 NOX5Q96PH1 765 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 RAB17Q9H0T7 212 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 AZI2Q9H6S1 392 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 TMBIM4Q9HC24 238 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 CYP26B1Q9NR63 512 aa9.57□□□□□ -0.88
SF3B2-216ENST00000534765 GGPS1O95749 300 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 KRT13P13646 458 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 PLS3P13797 630 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 TCF7P36402 384 aaPredicted RBP9.56□□□□□ -0.88
SF3B2-216ENST00000534765 EIF4A3P38919 411 aaKnown RBP9.56□□□□□ -0.88
SF3B2-216ENST00000534765 CCR3P51677 355 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 C6orf183Q5T699 404 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 ZNF746Q6NUN9 644 aaPredicted RBP9.56□□□□□ -0.88
SF3B2-216ENST00000534765 IRF2BP2Q7Z5L9 587 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 ARHGEF19Q8IW93 802 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 LRRC71Q8N4P6 559 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 ZNF516Q92618 1163 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 ABHD8Q96I13 439 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 PHF12Q96QT6 1004 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 PPP1R16BQ96T49 567 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 PLAGL2Q9UPG8 496 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 SNAI1O95863 264 aaPredicted RBP9.56□□□□□ -0.88
SF3B2-216ENST00000534765 EPB41P11171 864 aaKnown RBP9.56□□□□□ -0.88
SF3B2-216ENST00000534765 TARSP26639 723 aaKnown RBP9.56□□□□□ -0.88
SF3B2-216ENST00000534765 STX2P32856 288 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 GTF2BQ00403 316 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 STXBP2Q15833 593 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 CHST13Q8NET6 341 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 RAB3IL1Q8TBN0 382 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 SLC10A4Q96EP9 437 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 IWS1Q96ST2 819 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 GPR20Q99678 358 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 DDX47Q9H0S4 455 aaKnown RBP9.56□□□□□ -0.88
SF3B2-216ENST00000534765 PLCB1Q9NQ66 1216 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 NKX1-2Q9UD57 310 aaPredicted RBP9.56□□□□□ -0.88
SF3B2-216ENST00000534765 CHORDC1Q9UHD1 332 aaPredicted RBP9.56□□□□□ -0.88
SF3B2-216ENST00000534765 R3HDM2Q9Y2K5 976 aaKnown RBP9.56□□□□□ -0.88
SF3B2-216ENST00000534765 IVNS1ABPQ9Y6Y0 642 aa9.56□□□□□ -0.88
SF3B2-216ENST00000534765 CCL15-CCL14A0A0B4J2E2 113 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms