RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 CACTINQ8WUQ7 758 aaKnown RBP14.49□□□□□ -0.09
CAPN1-228ENST00000534373 PHOX2BQ99453 314 aa14.49□□□□□ -0.09
CAPN1-228ENST00000534373 TBC1D7Q9P0N9 293 aa14.49□□□□□ -0.09
CAPN1-228ENST00000534373 CEP72Q9P209 647 aa14.49□□□□□ -0.09
CAPN1-228ENST00000534373 TFIP11Q9UBB9 837 aaKnown RBP14.49□□□□□ -0.09
CAPN1-228ENST00000534373 SIT1Q9Y3P8 196 aa14.49□□□□□ -0.09
CAPN1-228ENST00000534373 ASB3Q9Y575 518 aa14.49□□□□□ -0.09
CAPN1-228ENST00000534373 SPTLC1O15269 473 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 HSP90AA1P07900 732 aaKnown RBP14.48□□□□□ -0.09
CAPN1-228ENST00000534373 PNPLA4P41247 253 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 NBL1P41271 181 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 ALDH1A3P47895 512 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 EPHB3P54753 998 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 DUSP4Q13115 394 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 E2F4Q16254 413 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 SLC44A4Q53GD3 710 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 METTL23Q86XA0 190 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 THEM5Q8N1Q8 247 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 TMEM130Q8N3G9 435 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 KCNG4Q8TDN1 519 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 ING5Q8WYH8 240 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 DDX23Q9BUQ8 820 aaKnown RBP14.48□□□□□ -0.09
CAPN1-228ENST00000534373 OSBPL6Q9BZF3 934 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 MAGEF1Q9HAY2 307 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 ZFP14Q9HCL3 533 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 ASAH2Q9NR71 780 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 YIPF1Q9Y548 306 aa14.48□□□□□ -0.09
CAPN1-228ENST00000534373 KANSL1LA0AUZ9 987 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 KPNA7A9QM74 516 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 CYB561D2O14569 222 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 EXTL3O43909 919 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 VNN2O95498 520 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 FGF19O95750 216 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 ZSCAN22P10073 491 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-228ENST00000534373 CEBPBP17676 345 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 CCR2P41597 374 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 TUFMP49411 452 aaKnown RBP14.47□□□□□ -0.09
CAPN1-228ENST00000534373 CASP5P51878 434 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 SNW1Q13573 536 aaKnown RBP14.47□□□□□ -0.09
CAPN1-228ENST00000534373 MLF2Q15773 248 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-228ENST00000534373 SV2CQ496J9 727 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 BRSK2Q8IWQ3 736 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 EFCAB13Q8IY85 973 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 ST13P5Q8NFI4 369 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-228ENST00000534373 C2orf15Q8WU43 125 aaKnown RBP14.47□□□□□ -0.09
CAPN1-228ENST00000534373 SMARCD2Q92925 531 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 E2F7Q96AV8 911 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 TCEAL4Q96EI5 215 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 BORCS6Q96GS4 357 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 ZNF560Q96MR9 790 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 ASB16Q96NS5 453 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 PGLYRP2Q96PD5 576 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 NELL2Q99435 816 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 KXD1Q9BQD3 176 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 FAM213AQ9BRX8 229 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 TRIM9Q9C026 710 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 IKZF4Q9H2S9 585 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 TRPV4Q9HBA0 871 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 FAM86C1Q9NVL1 165 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 CFAP45Q9UL16 551 aa14.47□□□□□ -0.09
CAPN1-228ENST00000534373 USP34Q70CQ2 3546 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 MTMR11A4FU01 709 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 OR4Q2P0C623 313 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 ANGPT1Q15389 498 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 FAM78AQ5JUQ0 283 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 TANGO2Q6ICL3 276 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 POTEHQ6S545 545 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 SHC4Q6S5L8 630 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 ITIH5Q86UX2 942 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 ATAD1Q8NBU5 361 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 PJA1Q8NG27 643 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 DNASE1L2Q92874 299 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 C7orf25Q9BPX7 421 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 PYM1Q9BRP8 204 aaKnown RBP14.46□□□□□ -0.09
CAPN1-228ENST00000534373 LRRC3Q9BY71 257 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 ZCWPW1Q9H0M4 648 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 KIAA1586Q9HCI6 787 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 TRPV5Q9NQA5 729 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 RBAKQ9NYW8 714 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-228ENST00000534373 DLGAP2Q9P1A6 1054 aa14.46□□□□□ -0.09
CAPN1-228ENST00000534373 MYO15AQ9UKN7 3530 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 MYH15Q9Y2K3 1946 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 EIF3DO15371 548 aaKnown RBP eCLIP14.45□□□□□ -0.1
CAPN1-228ENST00000534373 MOSPD3O75425 235 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 PRPF6O94906 941 aaKnown RBP14.45□□□□□ -0.1
CAPN1-228ENST00000534373 F13A1P00488 732 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 MYL4P12829 197 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 PSMC3P17980 439 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 FCARP24071 287 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 MAGEA9P43362 315 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 SNRPFP62306 86 aaKnown RBP14.45□□□□□ -0.1
CAPN1-228ENST00000534373 TFAMQ00059 246 aaKnown RBP14.45□□□□□ -0.1
CAPN1-228ENST00000534373 SURF1Q15526 300 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 DNAJB7Q7Z6W7 309 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-228ENST00000534373 DCP1BQ8IZD4 617 aaKnown RBP14.45□□□□□ -0.1
CAPN1-228ENST00000534373 HS6ST3Q8IZP7 471 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 GPD1LQ8N335 351 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 LRRC52Q8N7C0 313 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 OR10T2Q8NGX3 314 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 SPATA18Q8TC71 538 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms