RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 LRRN2O75325 713 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 MOSPD3O75425 235 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 GCNT3O95395 438 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 GLULP15104 373 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 GJA1P17302 382 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 NASPP49321 788 aaPredicted RBP9.64□□□□□ -0.87
COPB1-211ENST00000534234 EPHB3P54753 998 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 EPHA5P54756 1037 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 PLD1Q13393 1074 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 UBXN2BQ14CS0 331 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 STK38Q15208 465 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 L1TD1Q5T7N2 865 aaKnown RBP9.64□□□□□ -0.87
COPB1-211ENST00000534234 C1orf210Q8IVY1 113 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 SYCP3Q8IZU3 236 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 PDILTQ8N807 584 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 SMARCD2Q92925 531 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 ASB16Q96NS5 453 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 TMEM209Q96SK2 561 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 DDX23Q9BUQ8 820 aaKnown RBP9.64□□□□□ -0.87
COPB1-211ENST00000534234 TRMT61BQ9BVS5 477 aaKnown RBP9.64□□□□□ -0.87
COPB1-211ENST00000534234 CRISPLD1Q9H336 500 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 OLFML3Q9NRN5 406 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 TFIP11Q9UBB9 837 aaKnown RBP9.64□□□□□ -0.87
COPB1-211ENST00000534234 MTF2Q9Y483 593 aaPredicted RBP9.64□□□□□ -0.87
COPB1-211ENST00000534234 YIPF1Q9Y548 306 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 KMT2EQ8IZD2 1858 aa9.64□□□□□ -0.87
COPB1-211ENST00000534234 MTMR11A4FU01 709 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 NRG2O14511 850 aaPredicted RBP9.63□□□□□ -0.87
COPB1-211ENST00000534234 CYB561D2O14569 222 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 IL18RAPO95256 599 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 CYP11A1P05108 521 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 FCARP24071 287 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 TAF6P49848 677 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 GRM2Q14416 872 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 METTL23Q86XA0 190 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 THEM5Q8N1Q8 247 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 LINC00301Q8NCQ3 95 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 NELL2Q99435 816 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 PYM1Q9BRP8 204 aaKnown RBP9.63□□□□□ -0.87
COPB1-211ENST00000534234 FAM213AQ9BRX8 229 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 LRRC3Q9BY71 257 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 BCO2Q9BYV7 579 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 OSBPL6Q9BZF3 934 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 GPR88Q9GZN0 384 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 SLITRK6Q9H5Y7 841 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 BRD9Q9H8M2 597 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 HEBP1Q9NRV9 189 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 PANK4Q9NVE7 773 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 DSEQ9UL01 958 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 CACNA1HO95180 2353 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 A0A1W2PRU2 124 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 FRMD3A2A2Y4 597 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 KPNA7A9QM74 516 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 SPTLC2O15270 562 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 PRPF6O94906 941 aaKnown RBP9.63□□□□□ -0.87
COPB1-211ENST00000534234 LDHAP00338 332 aaKnown RBP9.63□□□□□ -0.87
COPB1-211ENST00000534234 PSMC3P17980 439 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 VIPR2P41587 438 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 TUFMP49411 452 aaKnown RBP9.63□□□□□ -0.87
COPB1-211ENST00000534234 CDR1P51861 262 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 CASP5P51878 434 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 TFAMQ00059 246 aaKnown RBP9.63□□□□□ -0.87
COPB1-211ENST00000534234 ALCAMQ13740 583 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 TEAD2Q15562 447 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 SLC39A12Q504Y0 691 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 WSCD1Q658N2 575 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 ZNF852Q6ZMS4 543 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 TPRG1Q6ZUI0 275 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 DNAJB7Q7Z6W7 309 aaPredicted RBP9.63□□□□□ -0.87
COPB1-211ENST00000534234 NT5DC4Q86YG4 428 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 CCDC65Q8IXS2 484 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 EFCAB13Q8IY85 973 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 ZSWIM2Q8NEG5 633 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 OR10T2Q8NGX3 314 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 SHKBP1Q8TBC3 707 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 ZSCAN18Q8TBC5 510 aaPredicted RBP9.63□□□□□ -0.87
COPB1-211ENST00000534234 IRF7Q92985 503 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 SAAL1Q96ER3 474 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 BORCS6Q96GS4 357 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 ZNF396Q96N95 335 aaPredicted RBP9.63□□□□□ -0.87
COPB1-211ENST00000534234 DNAJC25Q9H1X3 360 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 LTB4R2Q9NPC1 389 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 HSFX1Q9UBD0 423 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 ASB3Q9Y575 518 aa9.63□□□□□ -0.87
COPB1-211ENST00000534234 VWA8A3KMH1 1905 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 GOLGA8IPA6NC78 632 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 GOLGA8JA6NMD2 632 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 NCAM2O15394 837 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 PPP6R2O75170 966 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 SOAT2O75908 522 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 GARTP22102 1010 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 GDI1P31150 447 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 SV2CQ496J9 727 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 FOXD4L5Q5VV16 416 aaPredicted RBP9.62□□□□□ -0.87
COPB1-211ENST00000534234 VITQ6UXI7 678 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 MFSD6LQ8IWD5 586 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 BRSK2Q8IWQ3 736 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 TTC9BQ8N6N2 239 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 KCNG4Q8TDN1 519 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 NOC3LQ8WTT2 800 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms