RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 EXOC7Q9UPT5 735 aa6.69□□□□□ -1.34
CMTM1-220ENST00000534143 AKT3Q9Y243 479 aa6.69□□□□□ -1.34
CMTM1-220ENST00000534143 STYXL1Q9Y6J8 313 aa6.69□□□□□ -1.34
CMTM1-220ENST00000534143 ALPK3Q96L96 1907 aa6.69□□□□□ -1.34
CMTM1-220ENST00000534143 TISP43B9A030 160 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 PDE2AO00408 941 aaPredicted RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 ACKR2O00590 384 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 ABLIM1O14639 778 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 FSCN2O14926 492 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 CETN3O15182 167 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 B4GALT4O60513 344 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 ALX3O95076 343 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 CD4P01730 458 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 TFRCP02786 760 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 PRKCBP05771 671 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 COL6A1P12109 1028 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 ATP1A3P13637 1013 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 EDN3P14138 238 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 DARSP14868 501 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 GARTP22102 1010 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 PROZP22891 400 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 NR2F2P24468 414 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 RPL13P26373 211 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 CDC25BP30305 580 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 ADSSP30520 456 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 CD68P34810 354 aaPredicted RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 CASP4P49662 377 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 CRYBB1P53674 252 aaPredicted RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 TPM4P67936 248 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 MRPS6P82932 125 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 FANCCQ00597 558 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 DMTNQ08495 405 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 MGAT3Q09327 533 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 STRN3Q13033 797 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 ADAM9Q13443 819 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 MAPK6Q16659 721 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 TPD52L1Q16890 204 aaPredicted RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 KIZQ2M2Z5 673 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 TCP11X2Q5H9J9 407 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 DNTTIP2Q5QJE6 756 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 FAM117BQ6P1L5 589 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 ZPBP2Q6X784 338 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 GLYCTKQ8IVS8 523 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 DHX38Q92620 1227 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 EEF2KMTQ96G04 330 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 BORCS6Q96GS4 357 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 ZBTB45Q96K62 511 aaPredicted RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 FBXL18Q96ME1 805 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 OSMRQ99650 979 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 ACO2Q99798 780 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 TARS2Q9BW92 718 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 CELF4Q9BZC1 486 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 GCOM2Q9BZD3 368 aaPredicted RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 HAPLN2Q9GZV7 340 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 PTPRHQ9HD43 1115 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 TRMT13Q9NUP7 481 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 PRMT7Q9NVM4 692 aaPredicted RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 LIMA1Q9UHB6 759 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 CDY2AQ9Y6F7 541 aa6.68□□□□□ -1.34
CMTM1-220ENST00000534143 RANBP2P49792 3224 aaKnown RBP6.68□□□□□ -1.34
CMTM1-220ENST00000534143 A0A0B4J269 797 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 KCNJ18B7U540 433 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 INO80B-WBP1J3KQ70 363 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 KIAA0391O15091 583 aaKnown RBP6.67□□□□□ -1.34
CMTM1-220ENST00000534143 MAPK13O15264 365 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 B4GALT5O43286 388 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 ZNF500O60304 480 aaPredicted RBP6.67□□□□□ -1.34
CMTM1-220ENST00000534143 CAND2O75155 1236 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 CSDE1O75534 798 aaKnown RBP6.67□□□□□ -1.34
CMTM1-220ENST00000534143 TOM1L1O75674 476 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 AKAP3O75969 853 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 GNA14O95837 355 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 CHRNA1P02708 482 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 EIF4BP23588 611 aaKnown RBP6.67□□□□□ -1.34
CMTM1-220ENST00000534143 EEF1GP26641 437 aaKnown RBP6.67□□□□□ -1.34
CMTM1-220ENST00000534143 LIG4P49917 911 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 COPB1P53618 953 aaKnown RBP6.67□□□□□ -1.34
CMTM1-220ENST00000534143 SPAG1Q07617 926 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 RBL2Q08999 1139 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 TMEM62Q0P6H9 643 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 KCNJ12Q14500 433 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 NR1I3Q14994 352 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 SNX17Q15036 470 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 KRT31Q15323 416 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 PCBP1Q15365 356 aaKnown RBP eCLIP6.67□□□□□ -1.34
CMTM1-220ENST00000534143 HSP90AA4PQ58FG1 418 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 EEF1DP3Q658K8 133 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 SLFN12LQ6IEE8 588 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 ARMCX5Q6P1M9 558 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 SLC39A5Q6ZMH5 540 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 TSHZ1Q6ZSZ6 1077 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 FRMD5Q7Z6J6 570 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 RSPH3Q86UC2 560 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 FAM114A1Q8IWE2 563 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 TRIM59Q8IWR1 403 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 FAM126BQ8IXS8 530 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 ZSWIM2Q8NEG5 633 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 TMEM40Q8WWA1 233 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 NXPE3Q969Y0 559 aa6.67□□□□□ -1.34
CMTM1-220ENST00000534143 CNOT6LQ96LI5 555 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms