RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 TBX20Q9UMR3 447 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 PCDHB12Q9Y5F1 795 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 CDC42BPBQ9Y5S2 1711 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 FAM47DPA6NHR8 397 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 MAP3K13O43283 966 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ACO1P21399 889 aaKnown RBP6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 KLRC1P26715 233 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 SLC11A2P49281 568 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 PDCLQ13371 301 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 E2F5Q15329 346 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 PTRHD1Q6GMV3 140 aaKnown RBP6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 MIB1Q86YT6 1006 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 AGR3Q8TD06 166 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 AKT1S1Q96B36 256 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 SMYD3Q9H7B4 428 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ADA2Q9NZK5 511 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 FHOD1Q9Y613 1164 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 FOXP2O15409 715 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 SLC2A3P11169 496 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ZNF177Q13360 481 aaPredicted RBP6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 STAT4Q14765 748 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 CTXN3Q4LDR2 81 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 SPDYAQ5MJ70 313 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 CD302Q8IX05 232 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 GSPT2Q8IYD1 628 aaKnown RBP6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 CNPY4Q8N129 248 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ATP6V0D2Q8N8Y2 350 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 RNF208Q9H0X6 261 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 SLC25A13Q9UJS0 675 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 UNC13BO14795 1591 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 QRICH2Q9H0J4 1663 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 PTPRMP28827 1452 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ADM5C9JUS6 153 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 OGTO15294 1046 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 TADA3O75528 432 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 DDHD2O94830 711 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 CYP2C8P10632 490 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 SLC9A1P19634 815 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ZNF677Q86XU0 584 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 SAMD3Q8N6K7 520 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 HASPINQ8TF76 798 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 RSAD1Q9HA92 442 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 CHCHD3Q9NX63 227 aaKnown RBP6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ZC3H7BQ9UGR2 993 aaKnown RBP6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 FBXL5Q9UKA1 691 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 TPX2Q9ULW0 747 aaKnown RBP6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ZNF263O14978 683 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ZSCAN9O15535 394 aaPredicted RBP6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 MTSS1O43312 755 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 AP1G2O75843 785 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ATP1A1P05023 1023 aaKnown RBP6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 MUTP22033 750 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 PPP3CCP48454 512 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 RGS4P49798 205 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 MTFR1Q15390 333 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 MAPRE2Q15555 327 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 CCDC144BQ3MJ40 725 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 FBXO38Q6PIJ6 1188 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 OOSP2Q86WS3 158 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 ZNF507Q8TCN5 953 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 FBXO32Q969P5 355 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 RUBCNLQ9H714 662 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 TMX2Q9Y320 296 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 PKP3Q9Y446 797 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 CAMSAP1Q5T5Y3 1602 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 SETBP1Q9Y6X0 1596 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 PXDNLA1KZ92 1463 aa6.69□□□□□ -1.34
UBQLN1-206ENST00000533705 KPNA6O60684 536 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 ATP5HO75947 161 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 EGFRP00533 1210 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 GCKP35557 465 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 HERVK_113P62684 666 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 PPP2R2AP63151 447 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 USP10Q14694 798 aaKnown RBP6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 PKN3Q6P5Z2 889 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 IPMKQ8NFU5 416 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 CALML6Q8TD86 181 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 CEP19Q96LK0 163 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 RPRD1AQ96P16 312 aaPredicted RBP6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 SPATC1LQ9H0A9 340 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 ING2Q9H160 280 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 RNF103-CHMP3A0A140T963 221 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 A0A1B0GTH6 734 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 KDM1AO60341 852 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 BRD2P25440 801 aaKnown RBP6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 TROAPQ12815 778 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 SFSWAPQ12872 951 aaKnown RBP6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 TRADDQ15628 312 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 USP49Q70CQ1 688 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 ELMO2Q96JJ3 720 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 TGS1Q96RS0 853 aaKnown RBP6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 EHD4Q9H223 541 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 KIF17Q9P2E2 1029 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 RRP15Q9Y3B9 282 aaKnown RBP6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 DDTLA6NHG4 134 aaPredicted RBP6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 RNASEH1O60930 286 aaKnown RBP6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 ALDH2P05091 517 aa6.68□□□□□ -1.34
UBQLN1-206ENST00000533705 RPSAP08865 295 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms