RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 SESN2P58004 480 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-236ENST00000533667 KDSRQ06136 332 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 MFSD14CQ5VZR4 134 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 TAS2R42Q7RTR8 314 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 SH2D3CQ8N5H7 860 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 NIF3L1Q9GZT8 377 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 NEUROG2Q9H2A3 272 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 SARS2Q9NP81 518 aaKnown RBP7.34□□□□□ -1.23
CTNND1-236ENST00000533667 NDFIP2Q9NV92 336 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 SLC38A7Q9NVC3 462 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 GID8Q9NWU2 228 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 DFFAO00273 331 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 SRP72O76094 671 aaKnown RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 LCP1P13796 627 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 HOXD10P28358 340 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 HMOX2P30519 316 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 COILP38432 576 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 NFIXQ14938 502 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 EMC2Q15006 297 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 ZC3H12BQ5HYM0 836 aaKnown RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 NANOGNBQ7Z5D8 188 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 ATPAF2Q8N5M1 289 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 TBC1D19Q8N5T2 526 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 TNIP2Q8NFZ5 429 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 FEZF2Q8TBJ5 459 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 GANCQ8TET4 914 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 CPA5Q8WXQ8 436 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 ARL8AQ96BM9 186 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 RMDN1Q96DB5 314 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 ERP27Q96DN0 273 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 PAWRQ96IZ0 340 aaKnown RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 MAML3Q96JK9 1138 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 MXRA8Q9BRK3 442 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 KATNAL1Q9BW62 490 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 POLD4Q9HCU8 107 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 NPHS2Q9NP85 383 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 PRMT7Q9NVM4 692 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 ARHGEF38Q9NXL2 777 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 CDYLQ9Y232 598 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 FAM205CA6NFA0 338 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 H2AFYO75367 372 aaKnown RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 HIST1H2AGP0C0S8 130 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 WEE2P0C1S8 567 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 MYBP10242 640 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 HIST1H2ADP20671 130 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 GTF2H1P32780 548 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 ITIH4Q14624 930 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 SNX17Q15036 470 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 EFHC1Q5JVL4 640 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 RBM43Q6ZSC3 357 aaKnown RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 RRM2BQ7LG56 351 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 PTPRN2Q92932 1015 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 HIST1H2AHQ96KK5 128 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 MCEEQ96PE7 176 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 HIST1H2AJQ99878 128 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 SH3GL1Q99961 368 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 H2AFJQ9BTM1 129 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 SPON2Q9BUD6 331 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 NT5C1AQ9BXI3 368 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 SIK2Q9H0K1 926 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 VCPKMTQ9H867 229 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 CASS4Q9NQ75 786 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 PHF20L1A8MW92 1017 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 ZC3H11AO75152 810 aaKnown RBP eCLIP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 HLA-DRAP01903 254 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 TXNP10599 105 aaKnown RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 ATP6V1E1P36543 226 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 GEMIN4P57678 1058 aaKnown RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 PDAP1Q13442 181 aaKnown RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 USP10Q14694 798 aaKnown RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 BOLA3Q53S33 107 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 IER5Q5VY09 327 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 ZNF280DQ6N043 979 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 FBXO33Q7Z6M2 555 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 DNAJC9Q8WXX5 260 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 NSL1Q96IY1 281 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 CLMNQ96JQ2 1002 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 C9orf72Q96LT7 481 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 CATSPERBQ9H7T0 1116 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 EPB41L4AQ9HCS5 686 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 PRR12Q9ULL5 1215 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 NCOA3Q9Y6Q9 1424 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 GTPBP10A4D1E9 387 aaKnown RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 NEMP1O14524 444 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 DPYSL4O14531 572 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 MOCS2O96007 188 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-236ENST00000533667 NR3C2P08235 984 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 SLC9A1P19634 815 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 GPD1P21695 349 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 FDFT1P37268 417 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 ITGA8P53708 1063 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 CORO7P57737 925 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 PTK6Q13882 451 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 KYNUQ16719 465 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 KBTBD12Q3ZCT8 623 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 SV2CQ496J9 727 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 BTNL9Q6UXG8 535 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 ANKS3Q6ZW76 656 aa7.33□□□□□ -1.24
CTNND1-236ENST00000533667 SLC13A5Q86YT5 568 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms