RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 PIK3R5Q8WYR1 880 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 TTPALQ9BTX7 342 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 MMRN2Q9H8L6 949 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 RXFP1Q9HBX9 757 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 CBX8Q9HC52 389 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 NGRNQ9NPE2 291 aaKnown RBP13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 MYO9BQ13459 2157 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 TSC2P49815 1807 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 KCNJ18B7U540 433 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 TBC1D4O60343 1298 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 CXCL14O95715 111 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 ASS1P00966 412 aaKnown RBP13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 MXI1P50539 228 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 TRPC3Q13507 836 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 KCNJ12Q14500 433 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 MIIPQ5JXC2 388 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 DSTYKQ6XUX3 929 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 ADGRD2Q7Z7M1 963 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 ELMO3Q96BJ8 720 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 CYB561D2O14569 222 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 CAVIN2O95810 425 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 TYMPP19971 482 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 EEF1GP26641 437 aaKnown RBP13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 GTF2F1P35269 517 aaKnown RBP eCLIP13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 MYO1EQ12965 1108 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 SMC1AQ14683 1233 aaKnown RBP13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 PLPP4Q5VZY2 271 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 PRSS55Q6UWB4 352 aaPredicted RBP13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 LMO3Q8TAP4 145 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 RIN2Q8WYP3 895 aaPredicted RBP13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 APOBEC3GQ9HC16 384 aaKnown RBP13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 ENTPD7Q9NQZ7 604 aa13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 TIMM13Q9Y5L4 95 aaPredicted RBP13.67□□□□□ -0.22
RPUSD4-208ENST00000533628 P4HA2O15460 535 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 OAZ2O95190 189 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 CSPG5O95196 566 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 AFPP02771 609 aaKnown RBP13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 URODP06132 367 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 MAN2A1Q16706 1144 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 SOWAHAQ2M3V2 549 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 SGSM1Q2NKQ1 1148 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 VARS2Q5ST30 1063 aaKnown RBP13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 RSPO2Q6UXX9 243 aaPredicted RBP13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 APTXQ7Z2E3 356 aaKnown RBP13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 FBXL13Q8NEE6 735 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 TAF4BQ92750 862 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 GAS2L1Q99501 681 aaPredicted RBP13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 TUBGCP2Q9BSJ2 902 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 PI4K2AQ9BTU6 479 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 MRPL17Q9NRX2 175 aaKnown RBP13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 RAB20Q9NX57 234 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 MTRRQ9UBK8 725 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 L1RE1Q9UN81 338 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 SNX9Q9Y5X1 595 aa13.66□□□□□ -0.22
RPUSD4-208ENST00000533628 LRRC10BA6NIK2 292 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 SMTNL1A8MU46 457 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 C2CD2LO14523 706 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 CNPP09543 421 aaKnown RBP13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 PIK3CAP42336 1068 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 MTIF2P46199 727 aaKnown RBP13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 SLC20A2Q08357 652 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 WSCD1Q658N2 575 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 SPOPLQ6IQ16 392 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 PDCL2Q8N4E4 241 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 TOP6BLQ8N6T0 577 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 APPL2Q8NEU8 664 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 MICAL1Q8TDZ2 1067 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 KLHL5Q96PQ7 755 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 RTP3Q9BQQ7 232 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 CLSTN3Q9BQT9 956 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 NSUN3Q9H649 340 aaKnown RBP13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 FNIP2Q9P278 1114 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 MAGEC2Q9UBF1 373 aaPredicted RBP13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 LIMA1Q9UHB6 759 aaKnown RBP13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 POLIQ9UNA4 740 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 SSX2IPQ9Y2D8 614 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 BACE2Q9Y5Z0 518 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 ADAM12O43184 909 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 N4BP1O75113 896 aaKnown RBP13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 ODC1P11926 461 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 IGFBP4P22692 258 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 MYL7Q01449 175 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 KRT31Q15323 416 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 ZNF699Q32M78 642 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 WDR72Q3MJ13 1102 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 VWA3BQ502W6 1294 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 TCEAL5Q5H9L2 206 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 KIAA1841Q6NSI8 718 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 DPH6Q7L8W6 267 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 LUZP1Q86V48 1076 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 OSTM1Q86WC4 334 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 CREBRFQ8IUR6 639 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 KBTBD7Q8WVZ9 684 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 TSPY26PQ9H489 355 aa13.65□□□□□ -0.22
RPUSD4-208ENST00000533628 MYO7AQ13402 2215 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 GABRDO14764 452 aa13.64□□□□□ -0.23
RPUSD4-208ENST00000533628 TEX28O15482 410 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms