RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 NCANO14594 1321 aa17.13■□□□□ 0.33
CHMP4A-207ENST00000533523 SCN1AP35498 2009 aa17.13■□□□□ 0.33
CHMP4A-207ENST00000533523 SFI1A8K8P3 1242 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 SLC26A4O43511 780 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 MICAL2O94851 1124 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 CXCL8P10145 99 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 HOXB3P14651 431 aaPredicted RBP17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 MARCKSP29966 332 aaPredicted RBP17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 CDC25AP30304 524 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 RINT1Q6NUQ1 792 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 RNF19BQ6ZMZ0 732 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 KCNK18Q7Z418 384 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 TMEM130Q8N3G9 435 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 LEMD2Q8NC56 503 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 DEPDC1BQ8WUY9 529 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 CHAMP1Q96JM3 812 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 AK8Q96MA6 479 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 IER2Q9BTL4 223 aa17.12■□□□□ 0.33
CHMP4A-207ENST00000533523 DENND4CQ5VZ89 1909 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 VWA3AA6NCI4 1184 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 ZNF263O14978 683 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 MOSPD3O75425 235 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 TOM1L1O75674 476 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 SDHBP21912 280 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 CCR3P51677 355 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 NRLP54845 237 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 TEAD2Q15562 447 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 IL17AQ16552 155 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 PRR23BQ6ZRT6 265 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 C1orf186Q6ZWK4 172 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 MAP4K3Q8IVH8 894 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 YAF2Q8IY57 180 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 ZNF687Q8N1G0 1237 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 SHKBP1Q8TBC3 707 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 BICD1Q96G01 975 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 CDK5RAP3Q96JB5 506 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 PGLYRP2Q96PD5 576 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 C17orf75Q9HAS0 396 aa17.11■□□□□ 0.33
CHMP4A-207ENST00000533523 GREB1Q4ZG55 1949 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 HEPACAM2A8MVW5 462 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 PRR5-ARHGAP8B1AHC4 643 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 OR4Q2P0C623 313 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 ARHGAP8P85298 464 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 YWHAHQ04917 246 aaPredicted RBP17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 DNM1Q05193 864 aaKnown RBP17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 SPAG1Q07617 926 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 SLC10A6Q3KNW5 377 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 HYIQ5T013 277 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 CLEC17AQ6ZS10 378 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 CSGALNACT1Q8TDX6 532 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 KIF12Q96FN5 646 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 TIPINQ9BVW5 301 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 LMAN1LQ9HAT1 526 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 MAFFQ9ULX9 164 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 TIMM13Q9Y5L4 95 aaPredicted RBP17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 OBSL1O75147 1896 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 FREM2Q5SZK8 3169 aa17.1■□□□□ 0.33
CHMP4A-207ENST00000533523 PKD1L2Q7Z442 2459 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 A0A1W2PRU2 124 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 CLDN3O15551 220 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 MAPTP10636 758 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 PLS3P13797 630 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 CCNE1P24864 410 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 GUCY2CP25092 1073 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 SMTNP53814 917 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 EPHA5P54756 1037 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 SATB1Q01826 763 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 PLD1Q13393 1074 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 SF3A1Q15459 793 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 TMEM161BQ8NDZ6 487 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 ZNF396Q96N95 335 aaPredicted RBP17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 GBP4Q96PP9 640 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 MMTAG2Q9BU76 263 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 TRPV4Q9HBA0 871 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 TRPV5Q9NQA5 729 aa17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 SETXQ7Z333 2677 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-207ENST00000533523 SLC38A8A6NNN8 435 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 M0QZQ0 153 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 HOXC13P31276 330 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 LONP1P36776 959 aaKnown RBP17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 UBA7P41226 1012 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 SOX9P48436 509 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 GUCY2FP51841 1108 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 KPNA1P52294 538 aaPredicted RBP17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 PPP2R3AQ06190 1150 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 MCL1Q07820 350 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 SPEM2Q0P670 501 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 LAIR1Q6GTX8 287 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 ZPBP2Q6X784 338 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 USP37Q86T82 979 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 MFSD6LQ8IWD5 586 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 SPIRE2Q8WWL2 714 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 CALML4Q96GE6 196 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 PLIN2Q99541 437 aa17.08■□□□□ 0.32
CHMP4A-207ENST00000533523 VNN2O95498 520 aa17.07■□□□□ 0.32
CHMP4A-207ENST00000533523 CLTAP09496 248 aa17.07■□□□□ 0.32
CHMP4A-207ENST00000533523 LRPAP1P30533 357 aa17.07■□□□□ 0.32
CHMP4A-207ENST00000533523 EPHB3P54753 998 aa17.07■□□□□ 0.32
CHMP4A-207ENST00000533523 KRT85P78386 507 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms