RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 HSD17B3P37058 310 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 APOBEC3HQ6NTF7 200 aaKnown RBP18.43■□□□□ 0.54
PHRF1-205ENST00000533464 LRRC43Q8N309 656 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 OSGEPQ9NPF4 335 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 DMGDHQ9UI17 866 aaKnown RBP18.43■□□□□ 0.54
PHRF1-205ENST00000533464 ZNF235Q14590 738 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 RNF219Q5W0B1 726 aaPredicted RBP18.43■□□□□ 0.54
PHRF1-205ENST00000533464 SGSM3Q96HU1 749 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 MTMR12Q9C0I1 747 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 TMEM120BA0PK00 339 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 C3orf70A6NLC5 250 aaPredicted RBP18.43■□□□□ 0.54
PHRF1-205ENST00000533464 RGL2O15211 777 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 GARTP22102 1010 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 NAMPTP43490 491 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 DGKDQ16760 1214 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 C4orf19Q8IY42 314 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 DUSP9Q99956 384 aaKnown RBP18.43■□□□□ 0.54
PHRF1-205ENST00000533464 CYP4F11Q9HBI6 524 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 UBA6A0AVT1 1052 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-205ENST00000533464 CFAP73A6NFT4 308 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 TRAPPC3O43617 180 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 RPS6KA5O75582 802 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 NFKBIAP25963 317 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 CLCN3P51790 818 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 ZNF200P98182 395 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-205ENST00000533464 DEUP1Q05D60 604 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 GTF3C2Q8WUA4 911 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-205ENST00000533464 ROPN1BQ9BZX4 212 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-205ENST00000533464 TRIM4Q9C037 500 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 ROPN1Q9HAT0 212 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-205ENST00000533464 AGO4Q9HCK5 861 aaKnown RBP18.42■□□□□ 0.54
PHRF1-205ENST00000533464 PXMP2Q9NR77 195 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 PAK5Q9P286 719 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 CCDC78A2IDD5 438 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 DCAF6Q58WW2 860 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 DNAAF5Q86Y56 855 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 ORC6Q9Y5N6 252 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 AK9Q5TCS8 1911 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 CCDC22O60826 627 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 NPTXRO95502 500 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 FNTAP49354 379 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 ESRRGP62508 458 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 PDE1CQ14123 709 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-205ENST00000533464 GOLGA7BQ2TAP0 167 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 SRLQ86TD4 932 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 SPDYE1Q8NFV5 336 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-205ENST00000533464 KCNV2Q8TDN2 545 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 KLF6Q99612 283 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-205ENST00000533464 PPFIA2O75334 1257 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 PGK2P07205 417 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 WWP1Q9H0M0 922 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 LMCD1Q9NZU5 365 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 TJP2Q9UDY2 1190 aa18.42■□□□□ 0.54
PHRF1-205ENST00000533464 F8W8V4 182 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 CETPP11597 493 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 USP33Q8TEY7 942 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 ATG4AQ8WYN0 398 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 RMDN1Q96DB5 314 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 ZBTB18Q99592 522 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 BLOC1S4Q9NUP1 217 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 L1RE1Q9UN81 338 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 GZMAP12544 262 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 PLA2G4AP47712 749 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 ZNF157P51786 506 aaPredicted RBP18.41■□□□□ 0.54
PHRF1-205ENST00000533464 FAM71DQ8N9W8 422 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 E5RI56 91 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 GNL1P36915 607 aaPredicted RBP18.41■□□□□ 0.54
PHRF1-205ENST00000533464 NOTUMQ6P988 496 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 MTHFD1LQ6UB35 978 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 SAMD3Q8N6K7 520 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 SUDS3Q9H7L9 328 aaPredicted RBP18.41■□□□□ 0.54
PHRF1-205ENST00000533464 USP15Q9Y4E8 981 aaPredicted RBP18.41■□□□□ 0.54
PHRF1-205ENST00000533464 VEGFAP15692 232 aaPredicted RBP18.41■□□□□ 0.54
PHRF1-205ENST00000533464 FAM83AQ86UY5 434 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 ZFPM1Q8IX07 1006 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 SLC20A1Q8WUM9 679 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 CCDC138Q96M89 665 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 DRC3Q9H069 523 aa18.41■□□□□ 0.54
PHRF1-205ENST00000533464 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.41■□□□□ 0.544e-6■□□□□ 11
PHRF1-205ENST00000533464 EEF2KO00418 725 aaKnown RBP18.4■□□□□ 0.54
PHRF1-205ENST00000533464 ITGA4P13612 1032 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 ACADSBP45954 432 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 SV2AQ7L0J3 742 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 PARP9Q8IXQ6 854 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 THEGQ9P2T0 379 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 ORC1Q13415 861 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 COL9A3Q14050 684 aaPredicted RBP18.4■□□□□ 0.54
PHRF1-205ENST00000533464 TMC2Q8TDI7 906 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.4■□□□□ 0.54
PHRF1-205ENST00000533464 HACD3Q9P035 362 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 FAF1Q9UNN5 650 aaPredicted RBP18.4■□□□□ 0.54
PHRF1-205ENST00000533464 RRN3P2A6NIE6 340 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 SLITRK3O94933 977 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 RRM1P23921 792 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 SOX10P56693 466 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 GRIK5Q16478 980 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 SV2CQ496J9 727 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 TMEM119Q4V9L6 283 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 ARL8AQ96BM9 186 aa18.4■□□□□ 0.54
PHRF1-205ENST00000533464 KCNQ5Q9NR82 932 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms