RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 ARMCX5Q6P1M9 558 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 SHC4Q6S5L8 630 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 METTL23Q86XA0 190 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 CACTINQ8WUQ7 758 aaKnown RBP25.35■■□□□ 1.65
SMPD1-209ENST00000533196 ING5Q8WYH8 240 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 SHDQ96IW2 340 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 ZNF560Q96MR9 790 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 FAM213AQ9BRX8 229 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 TRIM9Q9C026 710 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 CFAP45Q9UL16 551 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 YIPF1Q9Y548 306 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 GPC5P78333 572 aa25.34■■□□□ 1.65
SMPD1-209ENST00000533196 EFCAB13Q8IY85 973 aa25.34■■□□□ 1.65
SMPD1-209ENST00000533196 CCDC105Q8IYK2 499 aa25.34■■□□□ 1.65
SMPD1-209ENST00000533196 ATOH1Q92858 354 aaPredicted RBP25.34■■□□□ 1.65
SMPD1-209ENST00000533196 DHX58Q96C10 678 aa25.34■■□□□ 1.65
SMPD1-209ENST00000533196 MCRS1Q96EZ8 462 aa25.34■■□□□ 1.65
SMPD1-209ENST00000533196 ASAH2Q9NR71 780 aa25.34■■□□□ 1.65
SMPD1-209ENST00000533196 CEP72Q9P209 647 aa25.34■■□□□ 1.65
SMPD1-209ENST00000533196 STK25O00506 426 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 EXTL3O43909 919 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 PRPF6O94906 941 aaKnown RBP25.33■■□□□ 1.65
SMPD1-209ENST00000533196 OR4Q2P0C623 313 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 CEBPBP17676 345 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 SMARCB1Q12824 385 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 SV2CQ496J9 727 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 CENPPQ6IPU0 288 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 ELSPBP1Q96BH3 223 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 PYM1Q9BRP8 204 aaKnown RBP25.33■■□□□ 1.65
SMPD1-209ENST00000533196 FGFBP2Q9BYJ0 223 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 TBC1D17Q9HA65 648 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 FAM13BQ9NYF5 915 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 RBAKQ9NYW8 714 aaPredicted RBP25.33■■□□□ 1.65
SMPD1-209ENST00000533196 ASB3Q9Y575 518 aa25.33■■□□□ 1.65
SMPD1-209ENST00000533196 CYB561D2O14569 222 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 EIF3DO15371 548 aaKnown RBP eCLIP25.32■■□□□ 1.64
SMPD1-209ENST00000533196 PI15O43692 258 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 VNN2O95498 520 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 EPHB3P54753 998 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 STARD6P59095 220 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 FOXD4L5Q5VV16 416 aaPredicted RBP25.32■■□□□ 1.64
SMPD1-209ENST00000533196 THEM5Q8N1Q8 247 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 GPD1LQ8N335 351 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 FOXD4L4Q8WXT5 416 aaPredicted RBP25.32■■□□□ 1.64
SMPD1-209ENST00000533196 SAAL1Q96ER3 474 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 PGLYRP2Q96PD5 576 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 C7orf25Q9BPX7 421 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 KXD1Q9BQD3 176 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 CBWD1Q9BRT8 395 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 GPR88Q9GZN0 384 aa25.32■■□□□ 1.64
SMPD1-209ENST00000533196 MTMR11A4FU01 709 aa25.31■■□□□ 1.64
SMPD1-209ENST00000533196 KPNA7A9QM74 516 aa25.31■■□□□ 1.64
SMPD1-209ENST00000533196 H0Y858 1186 aa25.31■■□□□ 1.64
SMPD1-209ENST00000533196 ALDH1A3P47895 512 aa25.31■■□□□ 1.64
SMPD1-209ENST00000533196 ASIC1P78348 528 aa25.31■■□□□ 1.64
SMPD1-209ENST00000533196 PRKCQQ04759 706 aa25.31■■□□□ 1.64
SMPD1-209ENST00000533196 DUSP4Q13115 394 aa25.31■■□□□ 1.64
SMPD1-209ENST00000533196 ST13P5Q8NFI4 369 aaPredicted RBP25.31■■□□□ 1.64
SMPD1-209ENST00000533196 C2orf15Q8WU43 125 aaKnown RBP25.31■■□□□ 1.64
SMPD1-209ENST00000533196 BORCS6Q96GS4 357 aa25.31■■□□□ 1.64
SMPD1-209ENST00000533196 PCDHA7Q9UN72 937 aa25.31■■□□□ 1.64
SMPD1-209ENST00000533196 CCR2P41597 374 aa25.3■■□□□ 1.64
SMPD1-209ENST00000533196 ME1P48163 572 aa25.3■■□□□ 1.64
SMPD1-209ENST00000533196 TFAMQ00059 246 aaKnown RBP25.3■■□□□ 1.64
SMPD1-209ENST00000533196 SURF1Q15526 300 aa25.3■■□□□ 1.64
SMPD1-209ENST00000533196 DTWD2Q8NBA8 298 aa25.3■■□□□ 1.64
SMPD1-209ENST00000533196 TCEAL4Q96EI5 215 aa25.3■■□□□ 1.64
SMPD1-209ENST00000533196 ZCWPW1Q9H0M4 648 aa25.3■■□□□ 1.64
SMPD1-209ENST00000533196 CRISPLD1Q9H336 500 aa25.3■■□□□ 1.64
SMPD1-209ENST00000533196 KIAA1586Q9HCI6 787 aa25.3■■□□□ 1.64
SMPD1-209ENST00000533196 MIA3Q5JRA6 1907 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 MYL4P12829 197 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 TUFMP49411 452 aaKnown RBP25.29■■□□□ 1.64
SMPD1-209ENST00000533196 SNRPFP62306 86 aaKnown RBP25.29■■□□□ 1.64
SMPD1-209ENST00000533196 FAM26FQ5R3K3 315 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 RESP18Q5W5W9 173 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 UNC13DQ70J99 1090 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 HS6ST3Q8IZP7 471 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 LRRC52Q8N7C0 313 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 ZSWIM2Q8NEG5 633 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 OR10T2Q8NGX3 314 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 ZNF507Q8TCN5 953 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 ASB16Q96NS5 453 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 PHOX2BQ99453 314 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 ZFP14Q9HCL3 533 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 RCOR1Q9UKL0 485 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 ITGA11Q9UKX5 1188 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 UBE4BO95155 1302 aa25.29■■□□□ 1.64
SMPD1-209ENST00000533196 PROB1E7EW31 1015 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 POLR2DO15514 142 aaKnown RBP25.28■■□□□ 1.64
SMPD1-209ENST00000533196 MOSPD3O75425 235 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 FGF19O95750 216 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 MLF2Q15773 248 aaPredicted RBP25.28■■□□□ 1.64
SMPD1-209ENST00000533196 SLC44A4Q53GD3 710 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 TANGO2Q6ICL3 276 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 POTEHQ6S545 545 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 EPM2AIP1Q7L775 607 aaPredicted RBP25.28■■□□□ 1.64
SMPD1-209ENST00000533196 ITIH5Q86UX2 942 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 C1orf127Q8N9H9 656 aa25.28■■□□□ 1.64
SMPD1-209ENST00000533196 ATAD1Q8NBU5 361 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms