RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MMTAG2Q9BU76 263 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 GPR88Q9GZN0 384 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 TNMDQ9H2S6 317 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 SERTAD1Q9UHV2 236 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 NEUROG3Q9Y4Z2 214 aa12.36□□□□□ -0.43
TRAPPC4-213ENST00000533149 SPEGQ15772 3267 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 A0A1B0GUA9 196 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 MYBPHLA2RUH7 354 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 CHADO15335 359 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 NPTXRO95502 500 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 VIPR2P41587 438 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 MBTD1Q05BQ5 628 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 KARSQ15046 597 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 ZRSR1Q15695 479 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 IQCEQ6IPM2 695 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 TCEAL6Q6IPX3 200 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 KRBA2Q6ZNG9 492 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 IQUBQ8NA54 791 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 ZSCAN18Q8TBC5 510 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 TCEAL3Q969E4 200 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 ZSWIM3Q96MP5 696 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 PLIN2Q99541 437 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 MTRQ99707 1265 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 C2orf42Q9NWW7 574 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 CCDC39Q9UFE4 941 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 VAV3Q9UKW4 847 aa12.35□□□□□ -0.43
TRAPPC4-213ENST00000533149 SLC38A8A6NNN8 435 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 HEPACAM2A8MVW5 462 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 SPECC1L-ADORA2AF8WAN1 911 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 NRG2O14511 850 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 TRAPPC3O43617 180 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 ACTN4O43707 911 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 ATG13O75143 517 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 RHOBTB1O94844 696 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 ABLIM3O94929 683 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 CAVIN2O95810 425 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 TOP3BO95985 862 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 P4HBP07237 508 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 CTHP32929 405 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 CCINQ13939 588 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 ELF2Q15723 593 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 AMHR2Q16671 573 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 SOWAHCQ53LP3 525 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 RRAGBQ5VZM2 374 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 KRT79Q5XKE5 535 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 NCAPH2Q6IBW4 605 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 SLC8B1Q6J4K2 584 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 TCEAL8Q8IYN2 117 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 PYM1Q9BRP8 204 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 NFKBIZQ9BYH8 718 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 ANKFY1Q9P2R3 1169 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 USP25Q9UHP3 1055 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 SLC8A2Q9UPR5 921 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 MSRB2Q9Y3D2 182 aa12.34□□□□□ -0.43
TRAPPC4-213ENST00000533149 SYCE3A1L190 88 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 TMEM189-UBE2V1I3L0A0 370 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 EML1O00423 815 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 EXTL3O43909 919 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 B3GAT3O94766 335 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 SLFN14P0C7P3 912 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 ATF2P15336 505 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 YWHABP31946 246 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 CCR2P41597 374 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 SOX9P48436 509 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 ZNF445P59923 1031 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 ROR1Q01973 937 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 FCHO2Q0JRZ9 810 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 E2F4Q16254 413 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 PLK5Q496M5 336 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 WDR44Q5JSH3 913 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 HAUS6Q7Z4H7 955 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 C4orf19Q8IY42 314 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 ELOA2Q8IYF1 753 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 CAMKK1Q8N5S9 505 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 RASSF8Q8NHQ8 419 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 SNX29Q8TEQ0 813 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 CALML4Q96GE6 196 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 ZNF512Q96ME7 567 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 PNMA5Q96PV4 448 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 CYP4F11Q9HBI6 524 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 TMEM9BQ9NQ34 198 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
TRAPPC4-213ENST00000533149 LNP1A1A4G5 178 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 PTGESO14684 152 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 B4GALT5O43286 388 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 SLC26A4O43511 780 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 CCT6AP40227 531 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 STAT6P42226 847 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 PXNP49023 591 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 CREB5Q02930 508 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 PPP2R5CQ13362 524 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 PON2Q15165 354 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 XKR9Q5GH70 373 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 TXNDC11Q6PKC3 985 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 RBM43Q6ZSC3 357 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 CDR2LQ86X02 465 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 CEP57L1Q8IYX8 460 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 ERMNQ8TAM6 284 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 DDX27Q96GQ7 796 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms