RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 P4HA2O15460 535 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 EFTUD2Q15029 972 aaKnown RBP eCLIP15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 TRADDQ15628 312 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 GRAMD1BQ3KR37 738 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 ZNF467Q7Z7K2 595 aaPredicted RBP15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 ACSF2Q96CM8 615 aaPredicted RBP15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 TSPAN17Q96FV3 270 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 MUC3BQ9H195 1237 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 SPAG7O75391 227 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 CYP2C8P10632 490 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 GRB10Q13322 594 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 HIF1AQ16665 826 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 EIF2AQ9BY44 585 aaKnown RBP15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 OLFML3Q9NRN5 406 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 TCRBV5S4A2TA0A5A2 114 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 GYG2O15488 501 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 LMNAP02545 664 aaKnown RBP15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 TMEM132BQ14DG7 1078 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 EFHC1Q5JVL4 640 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 RRM2BQ7LG56 351 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 HPDLQ96IR7 371 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 ELAC2Q9BQ52 826 aaKnown RBP15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 AKT1P31749 480 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 RAP1GAPP47736 663 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 ALDH7A1P49419 539 aaKnown RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 AARSP49588 968 aaKnown RBP eCLIP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 IL31Q6EBC2 164 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 TRAPPC11Q7Z392 1133 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 TAF1DQ9H5J8 278 aaPredicted RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 DPP3Q9NY33 737 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 UBQLN1Q9UMX0 589 aaKnown RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 PCDHB2Q9Y5E7 798 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 KDM1AO60341 852 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 GNL1P36915 607 aaPredicted RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 PCSK7Q16549 785 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 FHDC1Q9C0D6 1143 aaPredicted RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 MROH8Q9H579 483 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 METTL5Q9NRN9 209 aaKnown RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 CHCHD3Q9NX63 227 aaKnown RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 PCDHAC2Q9Y5I4 1007 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 CHUKO15111 745 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 BRAFP15056 766 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 HARS2P49590 506 aaKnown RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 TAF6P49848 677 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 FBXO38Q6PIJ6 1188 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 NIF3L1Q9GZT8 377 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 TMX2Q9Y320 296 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 MTFR1Q15390 333 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 RBBP7Q16576 425 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 DEFB128Q7Z7B8 93 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 ARRDC4Q8NCT1 418 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 PPP1R13LQ8WUF5 828 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 PABPC5Q96DU9 382 aaKnown RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 RNPC3Q96LT9 517 aaKnown RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 CYTH2Q99418 400 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 IRX2Q9BZI1 471 aaPredicted RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 TFR2Q9UP52 801 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 PRPF4O43172 522 aaKnown RBP eCLIP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 FGFR4P22455 802 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 SHMT1P34896 483 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 GPAT2Q6NUI2 795 aa15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 HIBCHQ6NVY1 386 aaPredicted RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 POP1Q99575 1024 aaKnown RBP15.5■□□□□ 0.07
PCDHA9-202ENST00000532602 SSU72P8A0A1W2PR75 194 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 EEF2KO00418 725 aaKnown RBP15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 MTSS1O43312 755 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 GFAPP14136 432 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 GALCP54803 685 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 ACBD5Q5T8D3 534 aaPredicted RBP15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 FAM47EQ6ZV65 393 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 TMEM8AQ9HCN3 771 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 SMARCAL1Q9NZC9 954 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 HAUS5O94927 633 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 ETFBP38117 255 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 SESN2P58004 480 aaPredicted RBP15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 SFSWAPQ12872 951 aaKnown RBP15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 NCAPHQ15003 741 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 DCAF6Q58WW2 860 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 GMCL1P1Q8NEA9 526 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 CLMNQ96JQ2 1002 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 AMACRQ9UHK6 382 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 GPR182O15218 404 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 DIAPH2O60879 1101 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 LRG1P02750 347 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 GCKP35557 465 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 STAT4Q14765 748 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 AGR3Q8TD06 166 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 ELMO3Q96BJ8 720 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 SCOCQ9UIL1 159 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 PPP2R3BQ9Y5P8 575 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 SLC18A3Q16572 532 aa15.49■□□□□ 0.07
PCDHA9-202ENST00000532602 CD302Q8IX05 232 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 PCSK9Q8NBP7 692 aaKnown RBP15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 ATP11BQ9Y2G3 1177 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 SUPT20HL2P0C7V6 817 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 BFSP2Q13515 415 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 PDK1Q15118 436 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 ZNF677Q86XU0 584 aa15.48■□□□□ 0.07
PCDHA9-202ENST00000532602 DDIASQ8IXT1 998 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms