RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 OXCT2Q9BYC2 517 aaPredicted RBP15.56■□□□□ 0.08
CPSF1-206ENST00000531480 DSEQ9UL01 958 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-206ENST00000531480 CYB561D2O14569 222 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 PAPLNO95428 1278 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 ASS1P00966 412 aaKnown RBP15.55■□□□□ 0.08
CPSF1-206ENST00000531480 CCDC192P0DO97 292 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 GTF2F1P35269 517 aaKnown RBP eCLIP15.55■□□□□ 0.08
CPSF1-206ENST00000531480 NRIP1P48552 1158 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 NDUFV1P49821 464 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 CLCN4P51793 760 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 MYL6P60660 151 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 ADAM15Q13444 863 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 ZSCAN23Q3MJ62 389 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 CCDC40Q4G0X9 1142 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 CBWD6Q4V339 395 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 CBWD3Q5JTY5 395 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 CBWD5Q5RIA9 395 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 CDKAL1Q5VV42 579 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 LILRA6Q6PI73 481 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 RSPO2Q6UXX9 243 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-206ENST00000531480 DSTYKQ6XUX3 929 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 PPFIBP1Q86W92 1011 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 CEP57Q86XR8 500 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 TMEM86AQ8N2M4 240 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 TAS1R2Q8TE23 839 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 FAXDC2Q96IV6 333 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 EMILIN2Q9BXX0 1053 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 DNAJC25Q9H1X3 360 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 TLE6Q9H808 572 aa15.55■□□□□ 0.08
CPSF1-206ENST00000531480 SYCE3A1L190 88 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 H7C4K7 107 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 C2CD2LO14523 706 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 GABRDO14764 452 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 P4HA2O15460 535 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 GLP2RO95838 553 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 HLA-DRAP01903 254 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 ADH1AP07327 375 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 FMO5P49326 533 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 MXI1P50539 228 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 YWHAHQ04917 246 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-206ENST00000531480 BIRC3Q13489 604 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 TRPC3Q13507 836 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 RAB33AQ14088 237 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 NCAPHQ15003 741 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 SOWAHAQ2M3V2 549 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 SGSM1Q2NKQ1 1148 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 PDCL2Q8N4E4 241 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 FBXL13Q8NEE6 735 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 VN1R2Q8NFZ6 395 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 PABPC5Q96DU9 382 aaKnown RBP15.54■□□□□ 0.08
CPSF1-206ENST00000531480 CNOT6LQ96LI5 555 aaKnown RBP15.54■□□□□ 0.08
CPSF1-206ENST00000531480 RTP3Q9BQQ7 232 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 HSD3B7Q9H2F3 369 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 FBXL5Q9UKA1 691 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 L1RE1Q9UN81 338 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 NFE2L3Q9Y4A8 694 aa15.54■□□□□ 0.08
CPSF1-206ENST00000531480 PER2O15055 1255 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 ADAM12O43184 909 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 N4BP1O75113 896 aaKnown RBP15.53■□□□□ 0.08
CPSF1-206ENST00000531480 PHACTR2O75167 634 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 TACC1O75410 805 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 LTBRP36941 435 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 MYL5Q02045 173 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 ANO6Q4KMQ2 910 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 DCAF17Q5H9S7 520 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-206ENST00000531480 WSCD1Q658N2 575 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 OVOS1Q6IE37 1185 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 ZNF280DQ6N043 979 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 FAM114A1Q8IWE2 563 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 HDAC7Q8WUI4 952 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 KBTBD7Q8WVZ9 684 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 SEMA4DQ92854 862 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 SAMSN1Q9NSI8 373 aaKnown RBP15.53■□□□□ 0.08
CPSF1-206ENST00000531480 R3HCC1Q9Y3T6 440 aaKnown RBP15.53■□□□□ 0.08
CPSF1-206ENST00000531480 TIMM13Q9Y5L4 95 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-206ENST00000531480 SNX9Q9Y5X1 595 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 HCFC2Q9Y5Z7 792 aa15.53■□□□□ 0.08
CPSF1-206ENST00000531480 OR6C75A6NL08 312 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 HUS1O60921 280 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 ABLIM3O94929 683 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 CSPG5O95196 566 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 PRKCSHP14314 528 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-206ENST00000531480 ZNF18P17022 549 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 RPL17P18621 184 aaKnown RBP15.52■□□□□ 0.08
CPSF1-206ENST00000531480 EEF1GP26641 437 aaKnown RBP15.52■□□□□ 0.08
CPSF1-206ENST00000531480 KCNH2Q12809 1159 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 ZNF699Q32M78 642 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 WDR72Q3MJ13 1102 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 CTXN3Q4LDR2 81 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 TCERG1LQ5VWI1 586 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 RBM23Q86U06 439 aaKnown RBP15.52■□□□□ 0.08
CPSF1-206ENST00000531480 LMO3Q8TAP4 145 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 BCO2Q9BYV7 579 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 NAT10Q9H0A0 1025 aaKnown RBP15.52■□□□□ 0.08
CPSF1-206ENST00000531480 FAM124BQ9H5Z6 455 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-206ENST00000531480 APOBEC3GQ9HC16 384 aaKnown RBP15.52■□□□□ 0.08
CPSF1-206ENST00000531480 RAB20Q9NX57 234 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 CLEC1BQ9P126 229 aa15.52■□□□□ 0.08
CPSF1-206ENST00000531480 THEGQ9P2T0 379 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms