RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ADSSL1Q8N142 457 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 DNASE1L2Q92874 299 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 SMARCD2Q92925 531 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 HVCN1Q96D96 273 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 DNAJC19Q96DA6 116 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 NELL2Q99435 816 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 STRA6Q9BX79 667 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 LRRC3Q9BY71 257 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 DNAJC25Q9H1X3 360 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 IKZF4Q9H2S9 585 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 HEBP1Q9NRV9 189 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 SEL1LQ9UBV2 794 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 C2CD2Q9Y426 696 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 R4GN57 208 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 PTPRZ1P23471 2315 aaPredicted RBP17.1■□□□□ 0.33
CPSF1-205ENST00000531042 ZNF292O60281 2723 aa17.1■□□□□ 0.33
CPSF1-205ENST00000531042 SCN1AP35498 2009 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 FANCMQ8IYD8 2048 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 CACNA1IQ9P0X4 2223 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 FAM186AA6NE01 2351 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 MTMR11A4FU01 709 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 MYMKA6NI61 221 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 SHISA7A6NL88 538 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 CYP11A1P05108 521 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 ADSSP30520 456 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 TXLNAP40222 546 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 CEBPZQ03701 1054 aaKnown RBP17.09■□□□□ 0.33
CPSF1-205ENST00000531042 ARMCX5Q6P1M9 558 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 CRELD2Q6UXH1 353 aaPredicted RBP17.09■□□□□ 0.33
CPSF1-205ENST00000531042 SV2BQ7L1I2 683 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 SHKBP1Q8TBC3 707 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 INTS4Q96HW7 963 aaKnown RBP17.09■□□□□ 0.33
CPSF1-205ENST00000531042 TMEM209Q96SK2 561 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 TRMT61BQ9BVS5 477 aaKnown RBP17.09■□□□□ 0.33
CPSF1-205ENST00000531042 BRD9Q9H8M2 597 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 MRPL44Q9H9J2 332 aaKnown RBP17.09■□□□□ 0.33
CPSF1-205ENST00000531042 TRPV4Q9HBA0 871 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 SLC27A5Q9Y2P5 690 aa17.09■□□□□ 0.33
CPSF1-205ENST00000531042 MORC2Q9Y6X9 1032 aaPredicted RBP17.09■□□□□ 0.33
CPSF1-205ENST00000531042 COL4A2P08572 1712 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 GAP43P17677 238 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 PSMC3P17980 439 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 TARSP26639 723 aaKnown RBP17.08■□□□□ 0.32
CPSF1-205ENST00000531042 VIPR2P41587 438 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 MAGEA9P43362 315 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 ALDH1A3P47895 512 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 EPHB3P54753 998 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 KCNA1Q09470 495 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 POSTNQ15063 836 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 TEAD2Q15562 447 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 ZC3H14Q6PJT7 736 aaKnown RBP17.08■□□□□ 0.32
CPSF1-205ENST00000531042 VITQ6UXI7 678 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 ZNF852Q6ZMS4 543 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 TMC8Q8IU68 726 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 ATAD1Q8NBU5 361 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 ZSCAN18Q8TBC5 510 aaPredicted RBP17.08■□□□□ 0.32
CPSF1-205ENST00000531042 POMGNT1Q8WZA1 660 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 CLDN23Q96B33 292 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 USP28Q96RU2 1077 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 GPR88Q9GZN0 384 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 SPATA6Q9NWH7 488 aaPredicted RBP17.08■□□□□ 0.32
CPSF1-205ENST00000531042 DPP3Q9NY33 737 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 TBC1D7Q9P0N9 293 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 HSFX1Q9UBD0 423 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 TCHHQ07283 1943 aa17.08■□□□□ 0.32
CPSF1-205ENST00000531042 A0A1W2PRU2 124 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 LAMTOR5O43504 91 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 LMNAP02545 664 aaKnown RBP17.07■□□□□ 0.32
CPSF1-205ENST00000531042 TAF6P49848 677 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 FZD5Q13467 585 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 L1TD1Q5T7N2 865 aaKnown RBP17.07■□□□□ 0.32
CPSF1-205ENST00000531042 CCDC73Q6ZRK6 1079 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 EFCAB13Q8IY85 973 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 TTC9BQ8N6N2 239 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 OR10T2Q8NGX3 314 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 KCNG4Q8TDN1 519 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 DEPDC1BQ8WUY9 529 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 IRF7Q92985 503 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 ZNF334Q9HCZ1 680 aaPredicted RBP17.07■□□□□ 0.32
CPSF1-205ENST00000531042 TRPV5Q9NQA5 729 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 FBXO4Q9UKT5 387 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 DSEQ9UL01 958 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 EXOC7Q9UPT5 735 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 MTMR6Q9Y217 621 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 MRPS17Q9Y2R5 130 aaKnown RBP17.07■□□□□ 0.32
CPSF1-205ENST00000531042 ASB3Q9Y575 518 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 TICRRQ7Z2Z1 1910 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 SPTBN4Q9H254 2564 aa17.07■□□□□ 0.32
CPSF1-205ENST00000531042 NCANO14594 1321 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 CYB561D2O14569 222 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 NCAM2O15394 837 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 SOAT2O75908 522 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 IL18RAPO95256 599 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 GDI1P31150 447 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 RPS9P46781 194 aaKnown RBP17.06■□□□□ 0.32
CPSF1-205ENST00000531042 ZNF528Q3MIS6 628 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 DNAJB7Q7Z6W7 309 aaPredicted RBP17.06■□□□□ 0.32
CPSF1-205ENST00000531042 NT5DC4Q86YG4 428 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 MFSD6LQ8IWD5 586 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms